Protein–RNA interactions for Protein: P08559

PDHA1, Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDHA1P08559 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDHA1P08559 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDHA1P08559 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDHA1P08559 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDHA1P08559 PTENP1-202ENST00000532280 3996 ntBASIC16.06■□□□□ 0.16
PDHA1P08559 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.06■□□□□ 0.16
PDHA1P08559 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.06■□□□□ 0.16
PDHA1P08559 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDHA1P08559 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.06■□□□□ 0.16
PDHA1P08559 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.06■□□□□ 0.16
PDHA1P08559 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDHA1P08559 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PDHA1P08559 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDHA1P08559 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDHA1P08559 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PDHA1P08559 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDHA1P08559 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.05■□□□□ 0.16
PDHA1P08559 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PDHA1P08559 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.05■□□□□ 0.16
PDHA1P08559 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDHA1P08559 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDHA1P08559 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDHA1P08559 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.05■□□□□ 0.16
PDHA1P08559 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDHA1P08559 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PDHA1P08559 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.05■□□□□ 0.16
PDHA1P08559 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDHA1P08559 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.05■□□□□ 0.16
PDHA1P08559 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDHA1P08559 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDHA1P08559 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.05■□□□□ 0.16
PDHA1P08559 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.05■□□□□ 0.16
PDHA1P08559 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.05■□□□□ 0.16
PDHA1P08559 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDHA1P08559 AC004890.2-204ENST00000481968 304 ntBASIC16.05■□□□□ 0.16
PDHA1P08559 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDHA1P08559 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.05■□□□□ 0.16
PDHA1P08559 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.05■□□□□ 0.16
PDHA1P08559 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.05■□□□□ 0.16
PDHA1P08559 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PDHA1P08559 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDHA1P08559 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.05■□□□□ 0.16
PDHA1P08559 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PDHA1P08559 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.05■□□□□ 0.16
PDHA1P08559 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.05■□□□□ 0.16
PDHA1P08559 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDHA1P08559 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.05■□□□□ 0.16
PDHA1P08559 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDHA1P08559 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDHA1P08559 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PDHA1P08559 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDHA1P08559 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDHA1P08559 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.05■□□□□ 0.16
PDHA1P08559 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDHA1P08559 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDHA1P08559 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDHA1P08559 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PDHA1P08559 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.04■□□□□ 0.16
PDHA1P08559 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDHA1P08559 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDHA1P08559 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PDHA1P08559 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDHA1P08559 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDHA1P08559 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PDHA1P08559 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PDHA1P08559 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.04■□□□□ 0.16
PDHA1P08559 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PDHA1P08559 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.04■□□□□ 0.16
PDHA1P08559 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.04■□□□□ 0.16
PDHA1P08559 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDHA1P08559 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.04■□□□□ 0.16
PDHA1P08559 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.04■□□□□ 0.16
PDHA1P08559 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDHA1P08559 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.04■□□□□ 0.16
PDHA1P08559 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.04■□□□□ 0.16
PDHA1P08559 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.04■□□□□ 0.16
PDHA1P08559 MIR6069-201ENST00000620069 79 ntBASIC16.04■□□□□ 0.16
PDHA1P08559 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.04■□□□□ 0.16
PDHA1P08559 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.04■□□□□ 0.16
PDHA1P08559 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDHA1P08559 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PDHA1P08559 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDHA1P08559 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PDHA1P08559 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.04■□□□□ 0.16
PDHA1P08559 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDHA1P08559 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.04■□□□□ 0.16
PDHA1P08559 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.04■□□□□ 0.16
PDHA1P08559 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDHA1P08559 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.04■□□□□ 0.16
PDHA1P08559 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
PDHA1P08559 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC16.04■□□□□ 0.16
PDHA1P08559 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDHA1P08559 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PDHA1P08559 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.04■□□□□ 0.16
PDHA1P08559 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PDHA1P08559 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.04■□□□□ 0.16
PDHA1P08559 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
PDHA1P08559 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.03■□□□□ 0.16
PDHA1P08559 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PDHA1P08559 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms