Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC087386.2-201ENST00000623212 4637 ntBASIC14.03□□□□□ -0.16
HLA-DPB1P04440 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DPB1P04440 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DPB1P04440 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DPB1P04440 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DPB1P04440 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DPB1P04440 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.02□□□□□ -0.16
HLA-DPB1P04440 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DPB1P04440 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.02□□□□□ -0.16
HLA-DPB1P04440 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DPB1P04440 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DPB1P04440 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
HLA-DPB1P04440 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.02□□□□□ -0.16
HLA-DPB1P04440 ELL2P1-201ENST00000413990 1906 ntBASIC14.02□□□□□ -0.16
HLA-DPB1P04440 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DPB1P04440 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.02□□□□□ -0.16
HLA-DPB1P04440 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.16
HLA-DPB1P04440 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DPB1P04440 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.02□□□□□ -0.16
HLA-DPB1P04440 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
HLA-DPB1P04440 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DPB1P04440 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DPB1P04440 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.02□□□□□ -0.16
HLA-DPB1P04440 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
HLA-DPB1P04440 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DPB1P04440 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DPB1P04440 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DPB1P04440 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DPB1P04440 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.02□□□□□ -0.17
HLA-DPB1P04440 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.02□□□□□ -0.17
HLA-DPB1P04440 RPSAP43-201ENST00000402237 625 ntBASIC14.02□□□□□ -0.17
HLA-DPB1P04440 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.02□□□□□ -0.17
HLA-DPB1P04440 SPDYE11-202ENST00000450699 704 ntBASIC14.02□□□□□ -0.17
HLA-DPB1P04440 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.02□□□□□ -0.17
HLA-DPB1P04440 KRT8P48-201ENST00000515599 1220 ntBASIC14.02□□□□□ -0.17
HLA-DPB1P04440 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.02□□□□□ -0.17
HLA-DPB1P04440 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.02□□□□□ -0.17
HLA-DPB1P04440 AC243562.2-201ENST00000561247 970 ntBASIC14.02□□□□□ -0.17
HLA-DPB1P04440 SPDYE9P-201ENST00000570642 692 ntBASIC14.02□□□□□ -0.17
HLA-DPB1P04440 MIR4313-201ENST00000580760 101 ntBASIC14.02□□□□□ -0.17
HLA-DPB1P04440 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DPB1P04440 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DPB1P04440 SPDYE10P-202ENST00000612005 668 ntBASIC14.02□□□□□ -0.17
HLA-DPB1P04440 SPDYE8P-202ENST00000612377 668 ntBASIC14.02□□□□□ -0.17
HLA-DPB1P04440 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DPB1P04440 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.02□□□□□ -0.17
HLA-DPB1P04440 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
HLA-DPB1P04440 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DPB1P04440 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DPB1P04440 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
HLA-DPB1P04440 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.02□□□□□ -0.17
HLA-DPB1P04440 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
HLA-DPB1P04440 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DPB1P04440 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DPB1P04440 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
HLA-DPB1P04440 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
HLA-DPB1P04440 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.02□□□□□ -0.17
HLA-DPB1P04440 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DPB1P04440 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DPB1P04440 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 AKAP8P1-201ENST00000434743 1349 ntBASIC14.01□□□□□ -0.17
HLA-DPB1P04440 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 UPF3AP3-201ENST00000420996 769 ntBASIC14.01□□□□□ -0.17
HLA-DPB1P04440 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 ADH5P3-201ENST00000433842 1137 ntBASIC14.01□□□□□ -0.17
HLA-DPB1P04440 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 ACTG1P14-201ENST00000446382 1122 ntBASIC14.01□□□□□ -0.17
HLA-DPB1P04440 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 PRYP6-201ENST00000514804 343 ntBASIC14.01□□□□□ -0.17
HLA-DPB1P04440 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 FAM86C2P-203ENST00000528684 1004 ntBASIC14.01□□□□□ -0.17
HLA-DPB1P04440 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms