Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCRP04035 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
HMGCRP04035 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCRP04035 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCRP04035 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCRP04035 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCRP04035 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCRP04035 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HMGCRP04035 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HMGCRP04035 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.34■□□□□ 0.37
HMGCRP04035 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCRP04035 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCRP04035 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCRP04035 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCRP04035 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCRP04035 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCRP04035 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.34■□□□□ 0.37
HMGCRP04035 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCRP04035 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.34■□□□□ 0.37
HMGCRP04035 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCRP04035 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCRP04035 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCRP04035 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCRP04035 AL645937.2-201ENST00000396808 931 ntBASIC17.34■□□□□ 0.37
HMGCRP04035 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HMGCRP04035 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HMGCRP04035 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCRP04035 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCRP04035 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCRP04035 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCRP04035 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCRP04035 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.34■□□□□ 0.37
HMGCRP04035 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HMGCRP04035 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.34■□□□□ 0.37
HMGCRP04035 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.34■□□□□ 0.37
HMGCRP04035 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.34■□□□□ 0.37
HMGCRP04035 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
HMGCRP04035 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.34■□□□□ 0.37
HMGCRP04035 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCRP04035 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCRP04035 AC006480.2-201ENST00000609770 1337 ntBASIC17.34■□□□□ 0.37
HMGCRP04035 AL023803.2-201ENST00000620080 638 ntBASIC17.34■□□□□ 0.37
HMGCRP04035 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.34■□□□□ 0.37
HMGCRP04035 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
HMGCRP04035 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HMGCRP04035 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCRP04035 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCRP04035 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
HMGCRP04035 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCRP04035 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
HMGCRP04035 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.33■□□□□ 0.37
HMGCRP04035 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.33■□□□□ 0.37
HMGCRP04035 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMGCRP04035 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMGCRP04035 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMGCRP04035 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMGCRP04035 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
HMGCRP04035 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.33■□□□□ 0.37
HMGCRP04035 KRT8P14-201ENST00000414254 1442 ntBASIC17.33■□□□□ 0.36
HMGCRP04035 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCRP04035 KRT8P29-201ENST00000420409 1371 ntBASIC17.33■□□□□ 0.36
HMGCRP04035 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
HMGCRP04035 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.33■□□□□ 0.36
HMGCRP04035 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCRP04035 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
HMGCRP04035 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCRP04035 MIR648-201ENST00000385046 94 ntBASIC17.33■□□□□ 0.36
HMGCRP04035 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCRP04035 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCRP04035 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.33■□□□□ 0.36
HMGCRP04035 AL596276.2-201ENST00000447525 331 ntBASIC17.33■□□□□ 0.36
HMGCRP04035 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.33■□□□□ 0.36
HMGCRP04035 AC021723.1-201ENST00000486306 515 ntBASIC17.33■□□□□ 0.36
HMGCRP04035 AC106794.1-201ENST00000506935 792 ntBASIC17.33■□□□□ 0.36
HMGCRP04035 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.33■□□□□ 0.36
HMGCRP04035 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.33■□□□□ 0.36
HMGCRP04035 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCRP04035 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.33■□□□□ 0.36
HMGCRP04035 AC026740.1-201ENST00000607068 791 ntBASIC17.33■□□□□ 0.36
HMGCRP04035 AC022748.3-201ENST00000621828 275 ntBASIC17.33■□□□□ 0.36
HMGCRP04035 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.33■□□□□ 0.36
HMGCRP04035 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.33■□□□□ 0.36
HMGCRP04035 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
HMGCRP04035 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.33■□□□□ 0.36
HMGCRP04035 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCRP04035 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCRP04035 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCRP04035 AL596087.1-201ENST00000400979 1969 ntBASIC17.33■□□□□ 0.36
HMGCRP04035 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCRP04035 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HMGCRP04035 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCRP04035 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCRP04035 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCRP04035 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCRP04035 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCRP04035 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCRP04035 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCRP04035 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.32■□□□□ 0.36
HMGCRP04035 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCRP04035 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms