Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 SPCS2P4-201ENST00000436160 681 ntBASIC15.89■□□□□ 0.13
MT-ND3P03897 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
MT-ND3P03897 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
MT-ND3P03897 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND3P03897 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.89■□□□□ 0.13
MT-ND3P03897 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.89■□□□□ 0.13
MT-ND3P03897 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.89■□□□□ 0.13
MT-ND3P03897 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND3P03897 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
MT-ND3P03897 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.89■□□□□ 0.13
MT-ND3P03897 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.89■□□□□ 0.13
MT-ND3P03897 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.89■□□□□ 0.13
MT-ND3P03897 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.89■□□□□ 0.13
MT-ND3P03897 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.89■□□□□ 0.13
MT-ND3P03897 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.89■□□□□ 0.13
MT-ND3P03897 Z92544.3-201ENST00000624747 417 ntBASIC15.89■□□□□ 0.13
MT-ND3P03897 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.89■□□□□ 0.13
MT-ND3P03897 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND3P03897 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.89■□□□□ 0.13
MT-ND3P03897 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.89■□□□□ 0.13
MT-ND3P03897 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.89■□□□□ 0.13
MT-ND3P03897 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND3P03897 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
MT-ND3P03897 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND3P03897 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
MT-ND3P03897 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND3P03897 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND3P03897 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
MT-ND3P03897 FGD5P1-202ENST00000614866 2498 ntBASIC15.89■□□□□ 0.13
MT-ND3P03897 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND3P03897 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND3P03897 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND3P03897 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
MT-ND3P03897 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND3P03897 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.89■□□□□ 0.13
MT-ND3P03897 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.89■□□□□ 0.13
MT-ND3P03897 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND3P03897 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
MT-ND3P03897 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND3P03897 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND3P03897 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
MT-ND3P03897 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND3P03897 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.88■□□□□ 0.13
MT-ND3P03897 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.88■□□□□ 0.13
MT-ND3P03897 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.88■□□□□ 0.13
MT-ND3P03897 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
MT-ND3P03897 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND3P03897 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND3P03897 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND3P03897 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.88■□□□□ 0.13
MT-ND3P03897 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
MT-ND3P03897 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND3P03897 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND3P03897 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
MT-ND3P03897 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND3P03897 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND3P03897 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND3P03897 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.88■□□□□ 0.13
MT-ND3P03897 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.88■□□□□ 0.13
MT-ND3P03897 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.88■□□□□ 0.13
MT-ND3P03897 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.88■□□□□ 0.13
MT-ND3P03897 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND3P03897 AC069262.1-201ENST00000539058 672 ntBASIC15.88■□□□□ 0.13
MT-ND3P03897 AC061975.2-201ENST00000581722 295 ntBASIC15.88■□□□□ 0.13
MT-ND3P03897 SPTSSB-204ENST00000617024 1292 ntBASIC15.88■□□□□ 0.13
MT-ND3P03897 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.88■□□□□ 0.13
MT-ND3P03897 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND3P03897 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
MT-ND3P03897 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.88■□□□□ 0.13
MT-ND3P03897 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND3P03897 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND3P03897 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND3P03897 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND3P03897 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.88■□□□□ 0.13
MT-ND3P03897 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.88■□□□□ 0.13
MT-ND3P03897 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND3P03897 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND3P03897 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND3P03897 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND3P03897 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND3P03897 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
MT-ND3P03897 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND3P03897 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
MT-ND3P03897 UXT-AS1-201ENST00000590504 1525 ntBASIC15.88■□□□□ 0.13
MT-ND3P03897 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND3P03897 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND3P03897 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND3P03897 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
MT-ND3P03897 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND3P03897 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.88■□□□□ 0.13
MT-ND3P03897 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
MT-ND3P03897 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.87■□□□□ 0.13
MT-ND3P03897 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MT-ND3P03897 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
MT-ND3P03897 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
MT-ND3P03897 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
MT-ND3P03897 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
MT-ND3P03897 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MT-ND3P03897 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
MT-ND3P03897 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms