Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14□□□□□ -0.17
SPTA1P02549 NOC2LP1-201ENST00000450578 752 ntBASIC14□□□□□ -0.17
SPTA1P02549 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
SPTA1P02549 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14□□□□□ -0.17
SPTA1P02549 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14□□□□□ -0.17
SPTA1P02549 PRSS30P-206ENST00000641773 873 ntBASIC14□□□□□ -0.17
SPTA1P02549 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SPTA1P02549 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SPTA1P02549 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SPTA1P02549 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
SPTA1P02549 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SPTA1P02549 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SPTA1P02549 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14□□□□□ -0.17
SPTA1P02549 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14□□□□□ -0.17
SPTA1P02549 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SPTA1P02549 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
SPTA1P02549 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SPTA1P02549 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SPTA1P02549 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14□□□□□ -0.17
SPTA1P02549 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SPTA1P02549 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14□□□□□ -0.17
SPTA1P02549 AC006335.1-201ENST00000445200 547 ntBASIC14□□□□□ -0.17
SPTA1P02549 PHKG1P2-201ENST00000457537 863 ntBASIC14□□□□□ -0.17
SPTA1P02549 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14□□□□□ -0.17
SPTA1P02549 EID1-202ENST00000560490 584 ntTSL 3 BASIC14□□□□□ -0.17
SPTA1P02549 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SPTA1P02549 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SPTA1P02549 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14□□□□□ -0.17
SPTA1P02549 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SPTA1P02549 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14□□□□□ -0.17
SPTA1P02549 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14□□□□□ -0.17
SPTA1P02549 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.99□□□□□ -0.17
SPTA1P02549 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPTA1P02549 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SPTA1P02549 AC068880.1-201ENST00000507289 2297 ntBASIC13.99□□□□□ -0.17
SPTA1P02549 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPTA1P02549 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPTA1P02549 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SPTA1P02549 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SPTA1P02549 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPTA1P02549 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.99□□□□□ -0.17
SPTA1P02549 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SPTA1P02549 AP001094.4-201ENST00000579008 2176 ntBASIC13.99□□□□□ -0.17
SPTA1P02549 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPTA1P02549 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SPTA1P02549 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SPTA1P02549 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SPTA1P02549 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SPTA1P02549 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC13.99□□□□□ -0.17
SPTA1P02549 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
SPTA1P02549 RNU1-114P-201ENST00000365297 166 ntBASIC13.99□□□□□ -0.17
SPTA1P02549 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
SPTA1P02549 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SPTA1P02549 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.99□□□□□ -0.17
SPTA1P02549 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC13.99□□□□□ -0.17
SPTA1P02549 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.99□□□□□ -0.17
SPTA1P02549 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPTA1P02549 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC13.99□□□□□ -0.17
SPTA1P02549 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.99□□□□□ -0.17
SPTA1P02549 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.99□□□□□ -0.17
SPTA1P02549 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.99□□□□□ -0.17
SPTA1P02549 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SPTA1P02549 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPTA1P02549 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPTA1P02549 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.99□□□□□ -0.17
SPTA1P02549 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPTA1P02549 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SPTA1P02549 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPTA1P02549 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SPTA1P02549 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.99□□□□□ -0.17
SPTA1P02549 AC138969.2-201ENST00000532739 9932 ntBASIC13.99□□□□□ -0.17
SPTA1P02549 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
SPTA1P02549 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SPTA1P02549 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SPTA1P02549 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.99□□□□□ -0.17
SPTA1P02549 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPTA1P02549 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SPTA1P02549 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
SPTA1P02549 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPTA1P02549 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SPTA1P02549 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SPTA1P02549 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
SPTA1P02549 PDIA3P2-201ENST00000428073 158 ntBASIC13.99□□□□□ -0.17
SPTA1P02549 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SPTA1P02549 MARK2P5-201ENST00000507649 634 ntBASIC13.99□□□□□ -0.17
SPTA1P02549 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC13.99□□□□□ -0.17
SPTA1P02549 MIR4754-201ENST00000582477 89 ntBASIC13.99□□□□□ -0.17
SPTA1P02549 AC073413.1-201ENST00000603927 732 ntBASIC13.99□□□□□ -0.17
SPTA1P02549 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPTA1P02549 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC13.98□□□□□ -0.17
SPTA1P02549 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.98□□□□□ -0.17
SPTA1P02549 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTA1P02549 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC13.98□□□□□ -0.17
SPTA1P02549 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTA1P02549 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTA1P02549 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SPTA1P02549 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTA1P02549 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SPTA1P02549 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTA1P02549 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms