Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDRT1O95170 FO538757.1-201ENST00000623083 1397 ntBASIC13.91□□□□□ -0.18
CDRT1O95170 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
CDRT1O95170 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDRT1O95170 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDRT1O95170 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.91□□□□□ -0.18
CDRT1O95170 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.91□□□□□ -0.18
CDRT1O95170 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDRT1O95170 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDRT1O95170 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDRT1O95170 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDRT1O95170 REXO1L1P-202ENST00000608646 1974 ntBASIC13.91□□□□□ -0.18
CDRT1O95170 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDRT1O95170 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDRT1O95170 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDRT1O95170 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CDRT1O95170 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.9□□□□□ -0.18
CDRT1O95170 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.9□□□□□ -0.18
CDRT1O95170 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CDRT1O95170 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CDRT1O95170 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDRT1O95170 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
CDRT1O95170 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.9□□□□□ -0.18
CDRT1O95170 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDRT1O95170 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CDRT1O95170 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.9□□□□□ -0.18
CDRT1O95170 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDRT1O95170 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CDRT1O95170 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDRT1O95170 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDRT1O95170 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDRT1O95170 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CDRT1O95170 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDRT1O95170 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDRT1O95170 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CDRT1O95170 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDRT1O95170 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CDRT1O95170 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.9□□□□□ -0.18
CDRT1O95170 IGLL3P-201ENST00000412472 434 ntBASIC13.9□□□□□ -0.18
CDRT1O95170 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.9□□□□□ -0.18
CDRT1O95170 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDRT1O95170 VN2R19P-201ENST00000442399 1052 ntBASIC13.9□□□□□ -0.18
CDRT1O95170 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.9□□□□□ -0.18
CDRT1O95170 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.9□□□□□ -0.18
CDRT1O95170 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDRT1O95170 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.9□□□□□ -0.18
CDRT1O95170 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDRT1O95170 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDRT1O95170 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDRT1O95170 ACE3P-201ENST00000423435 1973 ntBASIC13.9□□□□□ -0.18
CDRT1O95170 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDRT1O95170 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CDRT1O95170 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CDRT1O95170 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CDRT1O95170 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.9□□□□□ -0.18
CDRT1O95170 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDRT1O95170 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CDRT1O95170 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDRT1O95170 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDRT1O95170 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDRT1O95170 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
CDRT1O95170 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDRT1O95170 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDRT1O95170 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDRT1O95170 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
CDRT1O95170 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CDRT1O95170 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDRT1O95170 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDRT1O95170 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDRT1O95170 MTHFR-210ENST00000641407 2387 ntBASIC13.89□□□□□ -0.19
CDRT1O95170 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDRT1O95170 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDRT1O95170 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.89□□□□□ -0.19
CDRT1O95170 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.89□□□□□ -0.19
CDRT1O95170 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDRT1O95170 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.89□□□□□ -0.19
CDRT1O95170 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDRT1O95170 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDRT1O95170 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CDRT1O95170 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDRT1O95170 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDRT1O95170 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.89□□□□□ -0.19
CDRT1O95170 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.89□□□□□ -0.19
CDRT1O95170 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.89□□□□□ -0.19
CDRT1O95170 CRYGEP-201ENST00000412192 528 ntBASIC13.89□□□□□ -0.19
CDRT1O95170 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.89□□□□□ -0.19
CDRT1O95170 AC098831.1-202ENST00000438821 336 ntBASIC13.89□□□□□ -0.19
CDRT1O95170 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.89□□□□□ -0.19
CDRT1O95170 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.89□□□□□ -0.19
CDRT1O95170 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.89□□□□□ -0.19
CDRT1O95170 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.89□□□□□ -0.19
CDRT1O95170 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.89□□□□□ -0.19
CDRT1O95170 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.89□□□□□ -0.19
CDRT1O95170 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.89□□□□□ -0.19
CDRT1O95170 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.89□□□□□ -0.19
CDRT1O95170 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CDRT1O95170 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDRT1O95170 AL691432.3-201ENST00000621860 400 ntBASIC13.89□□□□□ -0.19
CDRT1O95170 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CDRT1O95170 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms