Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.2■□□□□ 0.18
BEST1O76090 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
BEST1O76090 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.2■□□□□ 0.18
BEST1O76090 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BEST1O76090 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.2■□□□□ 0.18
BEST1O76090 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BEST1O76090 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BEST1O76090 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
BEST1O76090 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.2■□□□□ 0.18
BEST1O76090 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.2■□□□□ 0.18
BEST1O76090 AL162727.3-201ENST00000635661 2787 ntBASIC16.2■□□□□ 0.18
BEST1O76090 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
BEST1O76090 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.19■□□□□ 0.18
BEST1O76090 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
BEST1O76090 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.19■□□□□ 0.18
BEST1O76090 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.19■□□□□ 0.18
BEST1O76090 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.19■□□□□ 0.18
BEST1O76090 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
BEST1O76090 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.19■□□□□ 0.18
BEST1O76090 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BEST1O76090 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.19■□□□□ 0.18
BEST1O76090 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
BEST1O76090 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.19■□□□□ 0.18
BEST1O76090 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BEST1O76090 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
BEST1O76090 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BEST1O76090 AC092933.1-201ENST00000393644 945 ntBASIC16.19■□□□□ 0.18
BEST1O76090 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.19■□□□□ 0.18
BEST1O76090 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BEST1O76090 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BEST1O76090 ACA64.2-201ENST00000459014 129 ntBASIC16.19■□□□□ 0.18
BEST1O76090 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.19■□□□□ 0.18
BEST1O76090 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BEST1O76090 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BEST1O76090 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.19■□□□□ 0.18
BEST1O76090 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.19■□□□□ 0.18
BEST1O76090 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
BEST1O76090 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.19■□□□□ 0.18
BEST1O76090 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.19■□□□□ 0.18
BEST1O76090 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BEST1O76090 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BEST1O76090 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
BEST1O76090 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.19■□□□□ 0.18
BEST1O76090 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BEST1O76090 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BEST1O76090 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BEST1O76090 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BEST1O76090 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.19■□□□□ 0.18
BEST1O76090 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BEST1O76090 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.19■□□□□ 0.18
BEST1O76090 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BEST1O76090 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.18■□□□□ 0.18
BEST1O76090 AL157414.3-201ENST00000624276 1954 ntBASIC16.18■□□□□ 0.18
BEST1O76090 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
BEST1O76090 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.18■□□□□ 0.18
BEST1O76090 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.18■□□□□ 0.18
BEST1O76090 AC092384.3-202ENST00000564646 2873 ntBASIC16.18■□□□□ 0.18
BEST1O76090 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BEST1O76090 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BEST1O76090 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.18■□□□□ 0.18
BEST1O76090 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.18■□□□□ 0.18
BEST1O76090 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
BEST1O76090 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
BEST1O76090 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BEST1O76090 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
BEST1O76090 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
BEST1O76090 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BEST1O76090 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BEST1O76090 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.18■□□□□ 0.18
BEST1O76090 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BEST1O76090 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.18■□□□□ 0.18
BEST1O76090 AC005229.1-201ENST00000392885 409 ntBASIC16.18■□□□□ 0.18
BEST1O76090 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
BEST1O76090 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
BEST1O76090 KLF2P2-201ENST00000416807 1039 ntBASIC16.18■□□□□ 0.18
BEST1O76090 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
BEST1O76090 ARSEP1-201ENST00000420443 635 ntBASIC16.18■□□□□ 0.18
BEST1O76090 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
BEST1O76090 SNX29P1-201ENST00000548357 1007 ntBASIC16.18■□□□□ 0.18
BEST1O76090 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.18■□□□□ 0.18
BEST1O76090 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BEST1O76090 GNRHR2-203ENST00000581100 1187 ntBASIC16.18■□□□□ 0.18
BEST1O76090 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.18■□□□□ 0.18
BEST1O76090 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.18■□□□□ 0.18
BEST1O76090 PRSS30P-206ENST00000641773 873 ntBASIC16.18■□□□□ 0.18
BEST1O76090 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BEST1O76090 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BEST1O76090 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BEST1O76090 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BEST1O76090 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BEST1O76090 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BEST1O76090 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.18■□□□□ 0.18
BEST1O76090 AC091951.1-201ENST00000512854 2465 ntBASIC16.18■□□□□ 0.18
BEST1O76090 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BEST1O76090 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
BEST1O76090 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
BEST1O76090 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
BEST1O76090 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BEST1O76090 REXO1L4P-201ENST00000605109 1937 ntBASIC16.17■□□□□ 0.18
BEST1O76090 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms