Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCNKO75909 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC13.5□□□□□ -0.25
CCNKO75909 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCNKO75909 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCNKO75909 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCNKO75909 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CCNKO75909 HYMAI.1-201ENST00000620949 238 ntBASIC13.5□□□□□ -0.25
CCNKO75909 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13.5□□□□□ -0.25
CCNKO75909 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.5□□□□□ -0.25
CCNKO75909 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.5□□□□□ -0.25
CCNKO75909 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCNKO75909 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCNKO75909 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCNKO75909 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.5□□□□□ -0.25
CCNKO75909 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CCNKO75909 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCNKO75909 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCNKO75909 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCNKO75909 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCNKO75909 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCNKO75909 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.5□□□□□ -0.25
CCNKO75909 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.5□□□□□ -0.25
CCNKO75909 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCNKO75909 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCNKO75909 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.5□□□□□ -0.25
CCNKO75909 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCNKO75909 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
CCNKO75909 AC114271.1-201ENST00000612689 2813 ntBASIC13.49□□□□□ -0.25
CCNKO75909 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.49□□□□□ -0.25
CCNKO75909 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCNKO75909 AC023090.2-201ENST00000625182 2110 ntBASIC13.49□□□□□ -0.25
CCNKO75909 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCNKO75909 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CCNKO75909 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCNKO75909 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCNKO75909 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCNKO75909 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCNKO75909 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CCNKO75909 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.49□□□□□ -0.25
CCNKO75909 AC015802.1-201ENST00000588104 1449 ntBASIC13.49□□□□□ -0.25
CCNKO75909 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
CCNKO75909 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCNKO75909 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CCNKO75909 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCNKO75909 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCNKO75909 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCNKO75909 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCNKO75909 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.49□□□□□ -0.25
CCNKO75909 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CCNKO75909 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.49□□□□□ -0.25
CCNKO75909 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.49□□□□□ -0.25
CCNKO75909 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCNKO75909 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCNKO75909 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC13.49□□□□□ -0.25
CCNKO75909 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13.49□□□□□ -0.25
CCNKO75909 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.49□□□□□ -0.25
CCNKO75909 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.49□□□□□ -0.25
CCNKO75909 SPDYE13P-201ENST00000445314 798 ntBASIC13.49□□□□□ -0.25
CCNKO75909 RN7SL606P-201ENST00000472779 293 ntBASIC13.49□□□□□ -0.25
CCNKO75909 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCNKO75909 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.49□□□□□ -0.25
CCNKO75909 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.49□□□□□ -0.25
CCNKO75909 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.49□□□□□ -0.25
CCNKO75909 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.49□□□□□ -0.25
CCNKO75909 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC13.49□□□□□ -0.25
CCNKO75909 AC145285.6-201ENST00000604632 637 ntBASIC13.49□□□□□ -0.25
CCNKO75909 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
CCNKO75909 AC124864.1-201ENST00000623408 392 ntBASIC13.49□□□□□ -0.25
CCNKO75909 DFFB-212ENST00000625756 649 ntTSL 5 BASIC13.49□□□□□ -0.25
CCNKO75909 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC13.49□□□□□ -0.25
CCNKO75909 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.49□□□□□ -0.25
CCNKO75909 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCNKO75909 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.49□□□□□ -0.25
CCNKO75909 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCNKO75909 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCNKO75909 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.49□□□□□ -0.25
CCNKO75909 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCNKO75909 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.49□□□□□ -0.25
CCNKO75909 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCNKO75909 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCNKO75909 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCNKO75909 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCNKO75909 AC004241.5-201ENST00000623870 2448 ntBASIC13.49□□□□□ -0.25
CCNKO75909 AC020658.7-201ENST00000624274 2442 ntBASIC13.49□□□□□ -0.25
CCNKO75909 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCNKO75909 ACE3P-201ENST00000423435 1973 ntBASIC13.49□□□□□ -0.25
CCNKO75909 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CCNKO75909 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.49□□□□□ -0.25
CCNKO75909 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCNKO75909 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC13.48□□□□□ -0.25
CCNKO75909 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.48□□□□□ -0.25
CCNKO75909 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCNKO75909 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CCNKO75909 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCNKO75909 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCNKO75909 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCNKO75909 MIR193BHG-211ENST00000641433 5365 ntBASIC13.48□□□□□ -0.25
CCNKO75909 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.48□□□□□ -0.25
CCNKO75909 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCNKO75909 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms