Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFS3O75489 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFS3O75489 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFS3O75489 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.5■□□□□ 0.07
NDUFS3O75489 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFS3O75489 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFS3O75489 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFS3O75489 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.5■□□□□ 0.07
NDUFS3O75489 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.5■□□□□ 0.07
NDUFS3O75489 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.5■□□□□ 0.07
NDUFS3O75489 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFS3O75489 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
NDUFS3O75489 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
NDUFS3O75489 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFS3O75489 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
NDUFS3O75489 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFS3O75489 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFS3O75489 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
NDUFS3O75489 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFS3O75489 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFS3O75489 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.5■□□□□ 0.07
NDUFS3O75489 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.5■□□□□ 0.07
NDUFS3O75489 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.5■□□□□ 0.07
NDUFS3O75489 TOMM22P5-201ENST00000416399 439 ntBASIC15.5■□□□□ 0.07
NDUFS3O75489 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
NDUFS3O75489 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
NDUFS3O75489 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.5■□□□□ 0.07
NDUFS3O75489 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.5■□□□□ 0.07
NDUFS3O75489 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.5■□□□□ 0.07
NDUFS3O75489 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.5■□□□□ 0.07
NDUFS3O75489 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
NDUFS3O75489 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFS3O75489 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.5■□□□□ 0.07
NDUFS3O75489 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
NDUFS3O75489 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.5■□□□□ 0.07
NDUFS3O75489 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.5■□□□□ 0.07
NDUFS3O75489 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
NDUFS3O75489 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFS3O75489 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFS3O75489 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFS3O75489 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.5■□□□□ 0.07
NDUFS3O75489 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFS3O75489 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
NDUFS3O75489 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
NDUFS3O75489 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFS3O75489 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFS3O75489 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFS3O75489 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFS3O75489 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFS3O75489 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.5■□□□□ 0.07
NDUFS3O75489 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFS3O75489 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
NDUFS3O75489 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFS3O75489 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFS3O75489 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFS3O75489 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFS3O75489 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFS3O75489 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFS3O75489 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFS3O75489 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFS3O75489 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFS3O75489 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFS3O75489 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.49■□□□□ 0.07
NDUFS3O75489 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.49■□□□□ 0.07
NDUFS3O75489 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFS3O75489 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
NDUFS3O75489 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFS3O75489 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.49■□□□□ 0.07
NDUFS3O75489 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFS3O75489 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFS3O75489 AC138969.3-201ENST00000546612 1459 ntBASIC15.49■□□□□ 0.07
NDUFS3O75489 AC138932.2-201ENST00000548268 1459 ntBASIC15.49■□□□□ 0.07
NDUFS3O75489 AC126755.4-201ENST00000549796 1459 ntBASIC15.49■□□□□ 0.07
NDUFS3O75489 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFS3O75489 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.49■□□□□ 0.07
NDUFS3O75489 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.49■□□□□ 0.07
NDUFS3O75489 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.49■□□□□ 0.07
NDUFS3O75489 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.49■□□□□ 0.07
NDUFS3O75489 TSSK5P-201ENST00000423978 907 ntBASIC15.49■□□□□ 0.07
NDUFS3O75489 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.49■□□□□ 0.07
NDUFS3O75489 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.49■□□□□ 0.07
NDUFS3O75489 KRT18P43-201ENST00000469825 1281 ntBASIC15.49■□□□□ 0.07
NDUFS3O75489 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.49■□□□□ 0.07
NDUFS3O75489 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.49■□□□□ 0.07
NDUFS3O75489 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.49■□□□□ 0.07
NDUFS3O75489 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.49■□□□□ 0.07
NDUFS3O75489 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.49■□□□□ 0.07
NDUFS3O75489 AC004461.2-201ENST00000629517 803 ntBASIC15.49■□□□□ 0.07
NDUFS3O75489 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFS3O75489 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.49■□□□□ 0.07
NDUFS3O75489 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFS3O75489 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFS3O75489 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFS3O75489 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.49■□□□□ 0.07
NDUFS3O75489 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFS3O75489 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFS3O75489 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
NDUFS3O75489 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
NDUFS3O75489 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFS3O75489 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms