Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
USH2AO75445 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
USH2AO75445 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 AC011270.2-201ENST00000624293 2550 ntBASIC6.72□□□□□ -1.33
USH2AO75445 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC6.72□□□□□ -1.33
USH2AO75445 AL139094.1-201ENST00000405549 1188 ntBASIC6.72□□□□□ -1.33
USH2AO75445 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
USH2AO75445 AC006328.1-201ENST00000437571 379 ntBASIC6.72□□□□□ -1.33
USH2AO75445 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC6.72□□□□□ -1.33
USH2AO75445 AL354861.1-201ENST00000445213 355 ntBASIC6.72□□□□□ -1.33
USH2AO75445 AC023906.1-201ENST00000486386 453 ntBASIC6.72□□□□□ -1.33
USH2AO75445 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC6.72□□□□□ -1.33
USH2AO75445 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
USH2AO75445 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
USH2AO75445 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 LRRC59-203ENST00000576448 1531 ntBASIC6.72□□□□□ -1.33
USH2AO75445 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC6.72□□□□□ -1.33
USH2AO75445 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
USH2AO75445 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC6.72□□□□□ -1.33
USH2AO75445 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC6.72□□□□□ -1.33
USH2AO75445 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
USH2AO75445 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC6.72□□□□□ -1.33
USH2AO75445 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
USH2AO75445 AC026434.2-201ENST00000506094 1078 ntBASIC6.72□□□□□ -1.33
USH2AO75445 AP001282.1-201ENST00000531301 1499 ntBASIC6.72□□□□□ -1.33
USH2AO75445 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC6.72□□□□□ -1.33
USH2AO75445 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
USH2AO75445 AC021321.1-201ENST00000607397 1113 ntBASIC6.72□□□□□ -1.33
USH2AO75445 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC6.72□□□□□ -1.33
USH2AO75445 LINC01783-202ENST00000614408 828 ntBASIC6.72□□□□□ -1.33
USH2AO75445 BX284668.2-205ENST00000619677 828 ntBASIC6.72□□□□□ -1.33
USH2AO75445 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
USH2AO75445 AC009090.5-201ENST00000624886 2285 ntBASIC6.72□□□□□ -1.33
USH2AO75445 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC6.72□□□□□ -1.33
USH2AO75445 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC6.72□□□□□ -1.33
USH2AO75445 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC6.72□□□□□ -1.33
USH2AO75445 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC6.72□□□□□ -1.33
USH2AO75445 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 AL157407.1-201ENST00000435784 904 ntBASIC6.72□□□□□ -1.33
USH2AO75445 CMC2-214ENST00000565925 640 ntTSL 5 BASIC6.72□□□□□ -1.33
USH2AO75445 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC6.72□□□□□ -1.33
USH2AO75445 NAV1-210ENST00000593583 726 ntBASIC6.72□□□□□ -1.33
USH2AO75445 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC6.72□□□□□ -1.33
USH2AO75445 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC6.72□□□□□ -1.33
USH2AO75445 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC6.72□□□□□ -1.33
USH2AO75445 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC6.72□□□□□ -1.33
USH2AO75445 STK26-204ENST00000481105 1835 ntTSL 2 BASIC6.72□□□□□ -1.33
USH2AO75445 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
USH2AO75445 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC6.72□□□□□ -1.33
USH2AO75445 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
USH2AO75445 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC6.72□□□□□ -1.33
USH2AO75445 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 GPR39-203ENST00000622084 900 ntTSL 5 BASIC6.72□□□□□ -1.33
USH2AO75445 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
USH2AO75445 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC6.72□□□□□ -1.33
USH2AO75445 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
USH2AO75445 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC6.71□□□□□ -1.33
USH2AO75445 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC6.71□□□□□ -1.33
USH2AO75445 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
USH2AO75445 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
USH2AO75445 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.33
USH2AO75445 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
USH2AO75445 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
USH2AO75445 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
USH2AO75445 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
USH2AO75445 AC013726.1-201ENST00000563747 2285 ntBASIC6.71□□□□□ -1.33
USH2AO75445 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.33
USH2AO75445 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
USH2AO75445 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC6.71□□□□□ -1.33
USH2AO75445 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC6.71□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms