Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AC148477.4-201ENST00000613430 1793 ntBASIC14.83□□□□□ -0.03
LCMT2O60294 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.83□□□□□ -0.03
LCMT2O60294 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.83□□□□□ -0.03
LCMT2O60294 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LCMT2O60294 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
LCMT2O60294 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LCMT2O60294 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.83□□□□□ -0.04
LCMT2O60294 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LCMT2O60294 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LCMT2O60294 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.83□□□□□ -0.04
LCMT2O60294 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LCMT2O60294 AC091951.1-201ENST00000512854 2465 ntBASIC14.83□□□□□ -0.04
LCMT2O60294 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LCMT2O60294 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
LCMT2O60294 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LCMT2O60294 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LCMT2O60294 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.83□□□□□ -0.04
LCMT2O60294 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LCMT2O60294 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.83□□□□□ -0.04
LCMT2O60294 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.83□□□□□ -0.04
LCMT2O60294 CRB3P1-201ENST00000449338 276 ntBASIC14.83□□□□□ -0.04
LCMT2O60294 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.83□□□□□ -0.04
LCMT2O60294 VDAC1P7-201ENST00000462417 847 ntBASIC14.83□□□□□ -0.04
LCMT2O60294 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.83□□□□□ -0.04
LCMT2O60294 ELK1P1-201ENST00000485699 580 ntBASIC14.83□□□□□ -0.04
LCMT2O60294 AC104596.2-201ENST00000512793 793 ntBASIC14.83□□□□□ -0.04
LCMT2O60294 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.83□□□□□ -0.04
LCMT2O60294 AC092552.1-201ENST00000547243 906 ntBASIC14.83□□□□□ -0.04
LCMT2O60294 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LCMT2O60294 TP53TG3HP-202ENST00000569755 579 ntBASIC14.83□□□□□ -0.04
LCMT2O60294 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.83□□□□□ -0.04
LCMT2O60294 CTBP2P3-201ENST00000585629 1255 ntBASIC14.83□□□□□ -0.04
LCMT2O60294 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.83□□□□□ -0.04
LCMT2O60294 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LCMT2O60294 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LCMT2O60294 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.83□□□□□ -0.04
LCMT2O60294 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LCMT2O60294 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
LCMT2O60294 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LCMT2O60294 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LCMT2O60294 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
LCMT2O60294 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LCMT2O60294 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LCMT2O60294 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LCMT2O60294 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LCMT2O60294 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LCMT2O60294 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LCMT2O60294 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LCMT2O60294 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LCMT2O60294 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LCMT2O60294 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LCMT2O60294 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCMT2O60294 AL136379.1-201ENST00000623471 2642 ntBASIC14.82□□□□□ -0.04
LCMT2O60294 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCMT2O60294 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.82□□□□□ -0.04
LCMT2O60294 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCMT2O60294 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.82□□□□□ -0.04
LCMT2O60294 AC126365.1-201ENST00000578585 1514 ntBASIC14.82□□□□□ -0.04
LCMT2O60294 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
LCMT2O60294 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCMT2O60294 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCMT2O60294 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCMT2O60294 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.82□□□□□ -0.04
LCMT2O60294 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LCMT2O60294 DBET-201ENST00000630918 3363 ntBASIC14.82□□□□□ -0.04
LCMT2O60294 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCMT2O60294 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCMT2O60294 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LCMT2O60294 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.82□□□□□ -0.04
LCMT2O60294 DGCR5-201ENST00000399539 862 ntBASIC14.82□□□□□ -0.04
LCMT2O60294 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.82□□□□□ -0.04
LCMT2O60294 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.82□□□□□ -0.04
LCMT2O60294 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.82□□□□□ -0.04
LCMT2O60294 WASH4P-201ENST00000564273 1246 ntBASIC14.82□□□□□ -0.04
LCMT2O60294 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.82□□□□□ -0.04
LCMT2O60294 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.82□□□□□ -0.04
LCMT2O60294 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
LCMT2O60294 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.82□□□□□ -0.04
LCMT2O60294 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LCMT2O60294 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.82□□□□□ -0.04
LCMT2O60294 TMEM261P1-201ENST00000604899 340 ntBASIC14.82□□□□□ -0.04
LCMT2O60294 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.82□□□□□ -0.04
LCMT2O60294 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.82□□□□□ -0.04
LCMT2O60294 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCMT2O60294 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
LCMT2O60294 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCMT2O60294 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCMT2O60294 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCMT2O60294 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCMT2O60294 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCMT2O60294 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LCMT2O60294 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LCMT2O60294 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.82□□□□□ -0.04
LCMT2O60294 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.82□□□□□ -0.04
LCMT2O60294 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.82□□□□□ -0.04
LCMT2O60294 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.82□□□□□ -0.04
LCMT2O60294 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCMT2O60294 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCMT2O60294 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.82□□□□□ -0.04
LCMT2O60294 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms