Protein–RNA interactions for Protein: O14543

SOCS3, Suppressor of cytokine signaling 3, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3O14543 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SOCS3O14543 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SOCS3O14543 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SOCS3O14543 TOMM22P5-201ENST00000416399 439 ntBASIC11.72□□□□□ -0.53
SOCS3O14543 AC092580.3-201ENST00000430932 139 ntBASIC11.72□□□□□ -0.53
SOCS3O14543 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC11.72□□□□□ -0.53
SOCS3O14543 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC11.72□□□□□ -0.53
SOCS3O14543 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC11.72□□□□□ -0.53
SOCS3O14543 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC11.72□□□□□ -0.53
SOCS3O14543 AC067863.1-201ENST00000494933 530 ntBASIC11.72□□□□□ -0.53
SOCS3O14543 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SOCS3O14543 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC11.72□□□□□ -0.53
SOCS3O14543 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SOCS3O14543 RPL28-205ENST00000558131 444 ntTSL 5 BASIC11.72□□□□□ -0.53
SOCS3O14543 AC004449.1-201ENST00000564240 433 ntBASIC11.72□□□□□ -0.53
SOCS3O14543 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC11.72□□□□□ -0.53
SOCS3O14543 AL158211.3-201ENST00000607385 239 ntBASIC11.72□□□□□ -0.53
SOCS3O14543 AL844908.2-201ENST00000609461 460 ntBASIC11.72□□□□□ -0.53
SOCS3O14543 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC11.72□□□□□ -0.53
SOCS3O14543 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC11.72□□□□□ -0.53
SOCS3O14543 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC11.72□□□□□ -0.53
SOCS3O14543 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SOCS3O14543 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SOCS3O14543 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SOCS3O14543 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
SOCS3O14543 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
SOCS3O14543 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SOCS3O14543 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC11.72□□□□□ -0.53
SOCS3O14543 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SOCS3O14543 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC11.72□□□□□ -0.53
SOCS3O14543 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SOCS3O14543 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SOCS3O14543 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SOCS3O14543 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SOCS3O14543 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SOCS3O14543 ZBED1P1-201ENST00000502364 1930 ntBASIC11.72□□□□□ -0.53
SOCS3O14543 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SOCS3O14543 CICP11-201ENST00000434745 2827 ntBASIC11.72□□□□□ -0.53
SOCS3O14543 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SOCS3O14543 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SOCS3O14543 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SOCS3O14543 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SOCS3O14543 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SOCS3O14543 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SOCS3O14543 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SOCS3O14543 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
SOCS3O14543 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
SOCS3O14543 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC11.72□□□□□ -0.53
SOCS3O14543 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SOCS3O14543 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
SOCS3O14543 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
SOCS3O14543 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SOCS3O14543 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC11.71□□□□□ -0.53
SOCS3O14543 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
SOCS3O14543 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SOCS3O14543 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SOCS3O14543 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC11.71□□□□□ -0.53
SOCS3O14543 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SOCS3O14543 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SOCS3O14543 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SOCS3O14543 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC11.71□□□□□ -0.53
SOCS3O14543 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SOCS3O14543 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SOCS3O14543 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC11.71□□□□□ -0.53
SOCS3O14543 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SOCS3O14543 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SOCS3O14543 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SOCS3O14543 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SOCS3O14543 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
SOCS3O14543 MARS-233ENST00000628866 2583 ntTSL 5 BASIC11.71□□□□□ -0.53
SOCS3O14543 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SOCS3O14543 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SOCS3O14543 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SOCS3O14543 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC11.71□□□□□ -0.53
SOCS3O14543 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC11.71□□□□□ -0.53
SOCS3O14543 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC11.71□□□□□ -0.53
SOCS3O14543 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC11.71□□□□□ -0.53
SOCS3O14543 KRT18P43-201ENST00000469825 1281 ntBASIC11.71□□□□□ -0.53
SOCS3O14543 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SOCS3O14543 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SOCS3O14543 SDHAP3-202ENST00000515467 728 ntBASIC11.71□□□□□ -0.53
SOCS3O14543 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC11.71□□□□□ -0.53
SOCS3O14543 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC11.71□□□□□ -0.53
SOCS3O14543 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC11.71□□□□□ -0.53
SOCS3O14543 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC11.71□□□□□ -0.53
SOCS3O14543 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC11.71□□□□□ -0.53
SOCS3O14543 AC093028.1-201ENST00000622998 982 ntBASIC11.71□□□□□ -0.53
SOCS3O14543 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC11.71□□□□□ -0.53
SOCS3O14543 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC11.71□□□□□ -0.53
SOCS3O14543 AL109936.8-201ENST00000641772 604 ntBASIC11.71□□□□□ -0.53
SOCS3O14543 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SOCS3O14543 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
SOCS3O14543 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
SOCS3O14543 ING5-213ENST00000636051 4199 ntTSL 5 BASIC11.71□□□□□ -0.54
SOCS3O14543 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SOCS3O14543 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC11.71□□□□□ -0.54
SOCS3O14543 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC11.71□□□□□ -0.54
SOCS3O14543 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
SOCS3O14543 GPI-205ENST00000586425 1799 ntTSL 5 BASIC11.71□□□□□ -0.54
SOCS3O14543 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms