Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CFAP99D6REC4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.57■□□□□ 0.08
CFAP99D6REC4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
CFAP99D6REC4 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CFAP99D6REC4 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CFAP99D6REC4 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
CFAP99D6REC4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CFAP99D6REC4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CFAP99D6REC4 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CFAP99D6REC4 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CFAP99D6REC4 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CFAP99D6REC4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CFAP99D6REC4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CFAP99D6REC4 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CFAP99D6REC4 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CFAP99D6REC4 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
CFAP99D6REC4 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.56■□□□□ 0.08
CFAP99D6REC4 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CFAP99D6REC4 AC092127.1-201ENST00000567093 3455 ntBASIC15.56■□□□□ 0.08
CFAP99D6REC4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.56■□□□□ 0.08
CFAP99D6REC4 FAM8A3P-201ENST00000427218 844 ntBASIC15.56■□□□□ 0.08
CFAP99D6REC4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.56■□□□□ 0.08
CFAP99D6REC4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.56■□□□□ 0.08
CFAP99D6REC4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.56■□□□□ 0.08
CFAP99D6REC4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.56■□□□□ 0.08
CFAP99D6REC4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.56■□□□□ 0.08
CFAP99D6REC4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
CFAP99D6REC4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
CFAP99D6REC4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CFAP99D6REC4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
CFAP99D6REC4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CFAP99D6REC4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.56■□□□□ 0.08
CFAP99D6REC4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.56■□□□□ 0.08
CFAP99D6REC4 AC008738.7-201ENST00000609744 511 ntBASIC15.56■□□□□ 0.08
CFAP99D6REC4 AC009118.2-201ENST00000613275 655 ntBASIC15.56■□□□□ 0.08
CFAP99D6REC4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.56■□□□□ 0.08
CFAP99D6REC4 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.56■□□□□ 0.08
CFAP99D6REC4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CFAP99D6REC4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.56■□□□□ 0.08
CFAP99D6REC4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.56■□□□□ 0.08
CFAP99D6REC4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.56■□□□□ 0.08
CFAP99D6REC4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.56■□□□□ 0.08
CFAP99D6REC4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.56■□□□□ 0.08
CFAP99D6REC4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CFAP99D6REC4 AC006058.4-201ENST00000624016 1670 ntBASIC15.56■□□□□ 0.08
CFAP99D6REC4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.56■□□□□ 0.08
CFAP99D6REC4 AC127383.1-201ENST00000444697 1800 ntBASIC15.56■□□□□ 0.08
CFAP99D6REC4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CFAP99D6REC4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CFAP99D6REC4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.56■□□□□ 0.08
CFAP99D6REC4 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.56■□□□□ 0.08
CFAP99D6REC4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CFAP99D6REC4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CFAP99D6REC4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CFAP99D6REC4 MYO15B-237ENST00000642007 4893 ntBASIC15.56■□□□□ 0.08
CFAP99D6REC4 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CFAP99D6REC4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CFAP99D6REC4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CFAP99D6REC4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CFAP99D6REC4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CFAP99D6REC4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CFAP99D6REC4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CFAP99D6REC4 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.55■□□□□ 0.08
CFAP99D6REC4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CFAP99D6REC4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CFAP99D6REC4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CFAP99D6REC4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CFAP99D6REC4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CFAP99D6REC4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.55■□□□□ 0.08
CFAP99D6REC4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.55■□□□□ 0.08
CFAP99D6REC4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.55■□□□□ 0.08
CFAP99D6REC4 MTND4LP12-201ENST00000448237 295 ntBASIC15.55■□□□□ 0.08
CFAP99D6REC4 AC092337.1-201ENST00000568699 1129 ntBASIC15.55■□□□□ 0.08
CFAP99D6REC4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
CFAP99D6REC4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.55■□□□□ 0.08
CFAP99D6REC4 LINC01115-203ENST00000606068 577 ntBASIC15.55■□□□□ 0.08
CFAP99D6REC4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CFAP99D6REC4 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.55■□□□□ 0.08
CFAP99D6REC4 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CFAP99D6REC4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CFAP99D6REC4 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CFAP99D6REC4 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CFAP99D6REC4 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CFAP99D6REC4 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CFAP99D6REC4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CFAP99D6REC4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CFAP99D6REC4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.55■□□□□ 0.08
CFAP99D6REC4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CFAP99D6REC4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CFAP99D6REC4 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CFAP99D6REC4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.55■□□□□ 0.08
CFAP99D6REC4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP99D6REC4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CFAP99D6REC4 OR2I1P-209ENST00000641730 5365 ntBASIC15.54■□□□□ 0.08
CFAP99D6REC4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP99D6REC4 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP99D6REC4 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP99D6REC4 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP99D6REC4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.54■□□□□ 0.08
CFAP99D6REC4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms