Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SRRM4A7MD48 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SRRM4A7MD48 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.52□□□□□ -0.41
SRRM4A7MD48 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC12.52□□□□□ -0.41
SRRM4A7MD48 KLF2P3-201ENST00000451977 1087 ntBASIC12.52□□□□□ -0.41
SRRM4A7MD48 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.52□□□□□ -0.41
SRRM4A7MD48 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.52□□□□□ -0.41
SRRM4A7MD48 AC027369.6-201ENST00000525520 931 ntBASIC12.52□□□□□ -0.41
SRRM4A7MD48 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.52□□□□□ -0.41
SRRM4A7MD48 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC12.52□□□□□ -0.41
SRRM4A7MD48 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SRRM4A7MD48 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.52□□□□□ -0.41
SRRM4A7MD48 AC015910.1-201ENST00000579400 975 ntBASIC12.52□□□□□ -0.41
SRRM4A7MD48 AC015911.4-201ENST00000588022 1070 ntBASIC12.52□□□□□ -0.41
SRRM4A7MD48 AP001160.2-201ENST00000596071 487 ntBASIC12.52□□□□□ -0.41
SRRM4A7MD48 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SRRM4A7MD48 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SRRM4A7MD48 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.52□□□□□ -0.41
SRRM4A7MD48 AC073592.8-201ENST00000624126 511 ntBASIC12.52□□□□□ -0.41
SRRM4A7MD48 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
SRRM4A7MD48 AL109936.8-201ENST00000641772 604 ntBASIC12.52□□□□□ -0.41
SRRM4A7MD48 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SRRM4A7MD48 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.52□□□□□ -0.41
SRRM4A7MD48 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SRRM4A7MD48 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SRRM4A7MD48 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SRRM4A7MD48 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SRRM4A7MD48 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SRRM4A7MD48 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SRRM4A7MD48 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SRRM4A7MD48 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SRRM4A7MD48 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SRRM4A7MD48 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.52□□□□□ -0.41
SRRM4A7MD48 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SRRM4A7MD48 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SRRM4A7MD48 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.51□□□□□ -0.41
SRRM4A7MD48 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.51□□□□□ -0.41
SRRM4A7MD48 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SRRM4A7MD48 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SRRM4A7MD48 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SRRM4A7MD48 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SRRM4A7MD48 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SRRM4A7MD48 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.51□□□□□ -0.41
SRRM4A7MD48 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SRRM4A7MD48 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SRRM4A7MD48 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SRRM4A7MD48 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SRRM4A7MD48 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.51□□□□□ -0.41
SRRM4A7MD48 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SRRM4A7MD48 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SRRM4A7MD48 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
SRRM4A7MD48 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SRRM4A7MD48 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SRRM4A7MD48 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SRRM4A7MD48 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SRRM4A7MD48 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
SRRM4A7MD48 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SRRM4A7MD48 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.51□□□□□ -0.41
SRRM4A7MD48 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.51□□□□□ -0.41
SRRM4A7MD48 AC015922.1-201ENST00000421102 1152 ntBASIC12.51□□□□□ -0.41
SRRM4A7MD48 AC092580.3-201ENST00000430932 139 ntBASIC12.51□□□□□ -0.41
SRRM4A7MD48 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC12.51□□□□□ -0.41
SRRM4A7MD48 RN7SL618P-201ENST00000477850 296 ntBASIC12.51□□□□□ -0.41
SRRM4A7MD48 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.51□□□□□ -0.41
SRRM4A7MD48 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC12.51□□□□□ -0.41
SRRM4A7MD48 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.51□□□□□ -0.41
SRRM4A7MD48 AC069120.2-201ENST00000524091 540 ntBASIC12.51□□□□□ -0.41
SRRM4A7MD48 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SRRM4A7MD48 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
SRRM4A7MD48 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.51□□□□□ -0.41
SRRM4A7MD48 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.51□□□□□ -0.41
SRRM4A7MD48 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC12.51□□□□□ -0.41
SRRM4A7MD48 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.51□□□□□ -0.41
SRRM4A7MD48 AC023511.2-201ENST00000618803 211 ntBASIC12.51□□□□□ -0.41
SRRM4A7MD48 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.51□□□□□ -0.41
SRRM4A7MD48 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SRRM4A7MD48 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SRRM4A7MD48 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SRRM4A7MD48 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SRRM4A7MD48 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SRRM4A7MD48 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SRRM4A7MD48 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SRRM4A7MD48 AJ011931.1-201ENST00000618749 2492 ntBASIC12.51□□□□□ -0.41
SRRM4A7MD48 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SRRM4A7MD48 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SRRM4A7MD48 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SRRM4A7MD48 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SRRM4A7MD48 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SRRM4A7MD48 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.51□□□□□ -0.41
SRRM4A7MD48 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
SRRM4A7MD48 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SRRM4A7MD48 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SRRM4A7MD48 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SRRM4A7MD48 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SRRM4A7MD48 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SRRM4A7MD48 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SRRM4A7MD48 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.5□□□□□ -0.41
SRRM4A7MD48 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRRM4A7MD48 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SRRM4A7MD48 AC013726.1-201ENST00000563747 2285 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms