Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RGPD3A6NKT7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RGPD3A6NKT7 AC004554.1-201ENST00000422830 1468 ntBASIC18.94■□□□□ 0.62
RGPD3A6NKT7 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RGPD3A6NKT7 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RGPD3A6NKT7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RGPD3A6NKT7 SRP14-204ENST00000558720 780 ntTSL 2 BASIC18.94■□□□□ 0.62
RGPD3A6NKT7 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC18.94■□□□□ 0.62
RGPD3A6NKT7 RN7SL665P-201ENST00000578793 300 ntBASIC18.94■□□□□ 0.62
RGPD3A6NKT7 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC18.94■□□□□ 0.62
RGPD3A6NKT7 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC18.94■□□□□ 0.62
RGPD3A6NKT7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RGPD3A6NKT7 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RGPD3A6NKT7 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RGPD3A6NKT7 ENPP7P8-202ENST00000527856 1345 ntBASIC18.94■□□□□ 0.62
RGPD3A6NKT7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RGPD3A6NKT7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RGPD3A6NKT7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.94■□□□□ 0.62
RGPD3A6NKT7 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RGPD3A6NKT7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RGPD3A6NKT7 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.94■□□□□ 0.62
RGPD3A6NKT7 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 AC083801.1-201ENST00000491689 358 ntBASIC18.93■□□□□ 0.62
RGPD3A6NKT7 GCOM2-201ENST00000509133 1104 ntBASIC18.93■□□□□ 0.62
RGPD3A6NKT7 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 ABHD17AP9-201ENST00000561925 548 ntBASIC18.93■□□□□ 0.62
RGPD3A6NKT7 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC18.93■□□□□ 0.62
RGPD3A6NKT7 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 KRT18P46-201ENST00000435568 1279 ntBASIC18.93■□□□□ 0.62
RGPD3A6NKT7 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 AC018470.1-201ENST00000624790 3129 ntBASIC18.93■□□□□ 0.62
RGPD3A6NKT7 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RGPD3A6NKT7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.92■□□□□ 0.62
RGPD3A6NKT7 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.92■□□□□ 0.62
RGPD3A6NKT7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RGPD3A6NKT7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RGPD3A6NKT7 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RGPD3A6NKT7 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RGPD3A6NKT7 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RGPD3A6NKT7 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC18.92■□□□□ 0.62
RGPD3A6NKT7 CISD2-202ENST00000503643 808 ntTSL 2 BASIC18.92■□□□□ 0.62
RGPD3A6NKT7 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RGPD3A6NKT7 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC18.92■□□□□ 0.62
RGPD3A6NKT7 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC18.92■□□□□ 0.62
RGPD3A6NKT7 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC18.92■□□□□ 0.62
RGPD3A6NKT7 BX088702.1-201ENST00000610784 235 ntBASIC18.92■□□□□ 0.62
RGPD3A6NKT7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RGPD3A6NKT7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.92■□□□□ 0.62
RGPD3A6NKT7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RGPD3A6NKT7 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC18.92■□□□□ 0.62
RGPD3A6NKT7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RGPD3A6NKT7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RGPD3A6NKT7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.91■□□□□ 0.62
RGPD3A6NKT7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RGPD3A6NKT7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RGPD3A6NKT7 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC18.91■□□□□ 0.62
RGPD3A6NKT7 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC18.91■□□□□ 0.62
RGPD3A6NKT7 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC18.91■□□□□ 0.62
RGPD3A6NKT7 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC18.91■□□□□ 0.62
RGPD3A6NKT7 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC18.91■□□□□ 0.62
RGPD3A6NKT7 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC18.91■□□□□ 0.62
RGPD3A6NKT7 AC006483.2-201ENST00000609813 515 ntBASIC18.91■□□□□ 0.62
RGPD3A6NKT7 MIR6746-201ENST00000620971 63 ntBASIC18.91■□□□□ 0.62
RGPD3A6NKT7 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC18.91■□□□□ 0.62
RGPD3A6NKT7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RGPD3A6NKT7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RGPD3A6NKT7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms