Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TCRBV3S1A0A5B6 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TCRBV3S1A0A5B6 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TCRBV3S1A0A5B6 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TCRBV3S1A0A5B6 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
TCRBV3S1A0A5B6 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TCRBV3S1A0A5B6 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TCRBV3S1A0A5B6 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
TCRBV3S1A0A5B6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.52□□□□□ -0.08
TCRBV3S1A0A5B6 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TCRBV3S1A0A5B6 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.52□□□□□ -0.08
TCRBV3S1A0A5B6 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TCRBV3S1A0A5B6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 AC142381.1-201ENST00000426099 345 ntBASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 AC009947.1-201ENST00000444350 727 ntBASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 IFNL4P1-201ENST00000607083 540 ntBASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 AL031008.1-201ENST00000619963 541 ntBASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 AC023090.2-201ENST00000625182 2110 ntBASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 FAM215A-202ENST00000632077 792 ntBASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
TCRBV3S1A0A5B6 AC007787.1-201ENST00000588095 1583 ntBASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 AC107918.4-201ENST00000641966 3141 ntBASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 AC104457.1-201ENST00000401024 814 ntBASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 FAM197Y8-203ENST00000450145 560 ntBASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 AC092910.1-201ENST00000482027 1129 ntBASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 C8orf49-201ENST00000525043 1968 ntBASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV3S1A0A5B6 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms