Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC187A0A096LP49 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 AL139094.1-201ENST00000405549 1188 ntBASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 FAM8A4P-201ENST00000435433 1213 ntBASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 AC004066.1-201ENST00000502488 802 ntBASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 AL023775.1-201ENST00000454907 1746 ntBASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC187A0A096LP49 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 HIST2H2BC-201ENST00000498492 580 ntBASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 NDUFV2P1-201ENST00000596415 907 ntBASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.62□□□□□ -0.07
CCDC187A0A096LP49 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 AL662844.4-201ENST00000606367 2838 ntBASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms