Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRIM17Q9Y577 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
TRIM17Q9Y577 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM17Q9Y577 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM17Q9Y577 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM17Q9Y577 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM17Q9Y577 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM17Q9Y577 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM17Q9Y577 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC17.34■□□□□ 0.37
TRIM17Q9Y577 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM17Q9Y577 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRIM17Q9Y577 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.34■□□□□ 0.37
TRIM17Q9Y577 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM17Q9Y577 AL645937.2-201ENST00000396808 931 ntBASIC17.34■□□□□ 0.37
TRIM17Q9Y577 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRIM17Q9Y577 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.34■□□□□ 0.37
TRIM17Q9Y577 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM17Q9Y577 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.34■□□□□ 0.37
TRIM17Q9Y577 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TRIM17Q9Y577 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
TRIM17Q9Y577 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRIM17Q9Y577 SNORD3B-2-202ENST00000571722 791 ntBASIC17.34■□□□□ 0.37
TRIM17Q9Y577 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC17.34■□□□□ 0.37
TRIM17Q9Y577 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM17Q9Y577 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM17Q9Y577 AL158070.2-201ENST00000623713 1621 ntBASIC17.34■□□□□ 0.37
TRIM17Q9Y577 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC17.34■□□□□ 0.37
TRIM17Q9Y577 CASP16P-204ENST00000635032 809 ntBASIC17.34■□□□□ 0.37
TRIM17Q9Y577 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRIM17Q9Y577 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM17Q9Y577 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM17Q9Y577 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
TRIM17Q9Y577 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM17Q9Y577 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM17Q9Y577 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM17Q9Y577 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM17Q9Y577 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.33■□□□□ 0.37
TRIM17Q9Y577 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM17Q9Y577 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM17Q9Y577 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM17Q9Y577 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.33■□□□□ 0.37
TRIM17Q9Y577 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM17Q9Y577 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.33■□□□□ 0.37
TRIM17Q9Y577 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 AC012362.1-201ENST00000434906 739 ntBASIC17.33■□□□□ 0.36
TRIM17Q9Y577 PFN2-206ENST00000461930 606 ntTSL 4 BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 AC004066.1-201ENST00000502488 802 ntBASIC17.33■□□□□ 0.36
TRIM17Q9Y577 POU5F1P2-201ENST00000521750 823 ntBASIC17.33■□□□□ 0.36
TRIM17Q9Y577 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM17Q9Y577 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.32■□□□□ 0.36
TRIM17Q9Y577 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms