Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.23■□□□□ 0.19
PPARGC1AQ9UBK2 AC104794.3-201ENST00000566840 1248 ntBASIC16.23■□□□□ 0.19
PPARGC1AQ9UBK2 MIR4745-201ENST00000577608 62 ntBASIC16.23■□□□□ 0.19
PPARGC1AQ9UBK2 RN7SL204P-201ENST00000582831 262 ntBASIC16.23■□□□□ 0.19
PPARGC1AQ9UBK2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.23■□□□□ 0.19
PPARGC1AQ9UBK2 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PPARGC1AQ9UBK2 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PPARGC1AQ9UBK2 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PPARGC1AQ9UBK2 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PPARGC1AQ9UBK2 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PPARGC1AQ9UBK2 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PPARGC1AQ9UBK2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.23■□□□□ 0.19
PPARGC1AQ9UBK2 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PPARGC1AQ9UBK2 AP003680.1-201ENST00000598970 3660 ntBASIC16.23■□□□□ 0.19
PPARGC1AQ9UBK2 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.23■□□□□ 0.19
PPARGC1AQ9UBK2 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PPARGC1AQ9UBK2 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PPARGC1AQ9UBK2 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.23■□□□□ 0.19
PPARGC1AQ9UBK2 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PPARGC1AQ9UBK2 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 MIR661-201ENST00000384842 89 ntBASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 KRT18P64-201ENST00000434946 1219 ntBASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 AC002472.2-201ENST00000442739 958 ntBASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 SERBP1P5-201ENST00000510079 1181 ntBASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 DOC2GP-202ENST00000514950 1163 ntBASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 LINC02560-201ENST00000596379 459 ntBASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 AC008761.3-201ENST00000624803 892 ntBASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 AC138969.3-201ENST00000546612 1459 ntBASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 AC138932.2-201ENST00000548268 1459 ntBASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 AC126755.4-201ENST00000549796 1459 ntBASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PPARGC1AQ9UBK2 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PPARGC1AQ9UBK2 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PPARGC1AQ9UBK2 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PPARGC1AQ9UBK2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PPARGC1AQ9UBK2 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PPARGC1AQ9UBK2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PPARGC1AQ9UBK2 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PPARGC1AQ9UBK2 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
PPARGC1AQ9UBK2 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.21■□□□□ 0.19
PPARGC1AQ9UBK2 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PPARGC1AQ9UBK2 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PPARGC1AQ9UBK2 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
PPARGC1AQ9UBK2 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
PPARGC1AQ9UBK2 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PPARGC1AQ9UBK2 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PPARGC1AQ9UBK2 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PPARGC1AQ9UBK2 AC007326.2-201ENST00000624224 7579 ntBASIC16.21■□□□□ 0.19
PPARGC1AQ9UBK2 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.21■□□□□ 0.19
PPARGC1AQ9UBK2 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PPARGC1AQ9UBK2 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PPARGC1AQ9UBK2 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.21■□□□□ 0.19
PPARGC1AQ9UBK2 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.21■□□□□ 0.19
PPARGC1AQ9UBK2 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.21■□□□□ 0.19
PPARGC1AQ9UBK2 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.21■□□□□ 0.19
PPARGC1AQ9UBK2 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.21■□□□□ 0.19
PPARGC1AQ9UBK2 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.21■□□□□ 0.19
PPARGC1AQ9UBK2 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PPARGC1AQ9UBK2 AC092364.2-202ENST00000597012 1073 ntBASIC16.21■□□□□ 0.19
PPARGC1AQ9UBK2 AC004790.1-201ENST00000612686 536 ntBASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms