Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 KRT223P-202ENST00000449164 1292 ntBASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 AC104989.1-201ENST00000519711 778 ntBASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 MIR4259-201ENST00000584466 101 ntBASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 AC133552.6-201ENST00000613406 534 ntBASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 AC022188.1-201ENST00000620960 1664 ntBASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 AP005117.1-202ENST00000581724 1908 ntBASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CLCF1Q9UBD9 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
CLCF1Q9UBD9 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CLCF1Q9UBD9 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CLCF1Q9UBD9 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
CLCF1Q9UBD9 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CLCF1Q9UBD9 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CLCF1Q9UBD9 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CLCF1Q9UBD9 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 AP005019.2-201ENST00000615104 511 ntBASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 BX539320.1-201ENST00000623759 877 ntBASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.77□□□□□ -0.21
CLCF1Q9UBD9 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms