Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 MIR6775-201ENST00000617557 69 ntBASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMG20BQ9P0W2 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 MIR658-201ENST00000385210 100 ntBASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 AC012441.1-201ENST00000446669 685 ntBASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMG20BQ9P0W2 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 AC134312.5-201ENST00000568031 1313 ntBASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 ACKR1-201ENST00000368121 1240 ntBASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 AC005229.1-201ENST00000392885 409 ntBASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 AC092933.1-201ENST00000393644 945 ntBASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms