Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.84■□□□□ 0.61
ECHDC1Q9NTX5 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.84■□□□□ 0.61
ECHDC1Q9NTX5 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.84■□□□□ 0.61
ECHDC1Q9NTX5 WFDC1-204ENST00000613603 549 ntBASIC18.84■□□□□ 0.61
ECHDC1Q9NTX5 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
ECHDC1Q9NTX5 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.84■□□□□ 0.61
ECHDC1Q9NTX5 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ECHDC1Q9NTX5 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ECHDC1Q9NTX5 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ECHDC1Q9NTX5 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.84■□□□□ 0.61
ECHDC1Q9NTX5 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
ECHDC1Q9NTX5 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ECHDC1Q9NTX5 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.84■□□□□ 0.61
ECHDC1Q9NTX5 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ECHDC1Q9NTX5 ZBTB45P1-201ENST00000452761 1456 ntBASIC18.84■□□□□ 0.61
ECHDC1Q9NTX5 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ECHDC1Q9NTX5 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.84■□□□□ 0.61
ECHDC1Q9NTX5 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
ECHDC1Q9NTX5 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ECHDC1Q9NTX5 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ECHDC1Q9NTX5 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.83■□□□□ 0.61
ECHDC1Q9NTX5 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.83■□□□□ 0.61
ECHDC1Q9NTX5 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.83■□□□□ 0.61
ECHDC1Q9NTX5 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.83■□□□□ 0.61
ECHDC1Q9NTX5 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ECHDC1Q9NTX5 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ECHDC1Q9NTX5 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
ECHDC1Q9NTX5 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ECHDC1Q9NTX5 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
ECHDC1Q9NTX5 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.83■□□□□ 0.61
ECHDC1Q9NTX5 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.83■□□□□ 0.61
ECHDC1Q9NTX5 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
ECHDC1Q9NTX5 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ECHDC1Q9NTX5 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ECHDC1Q9NTX5 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ECHDC1Q9NTX5 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ECHDC1Q9NTX5 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ECHDC1Q9NTX5 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.83■□□□□ 0.6
ECHDC1Q9NTX5 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.83■□□□□ 0.6
ECHDC1Q9NTX5 AC004066.1-201ENST00000502488 802 ntBASIC18.83■□□□□ 0.6
ECHDC1Q9NTX5 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.83■□□□□ 0.6
ECHDC1Q9NTX5 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.83■□□□□ 0.6
ECHDC1Q9NTX5 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
ECHDC1Q9NTX5 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
ECHDC1Q9NTX5 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ECHDC1Q9NTX5 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ECHDC1Q9NTX5 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.83■□□□□ 0.6
ECHDC1Q9NTX5 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
ECHDC1Q9NTX5 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ECHDC1Q9NTX5 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.83■□□□□ 0.6
ECHDC1Q9NTX5 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.83■□□□□ 0.6
ECHDC1Q9NTX5 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ECHDC1Q9NTX5 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ECHDC1Q9NTX5 KRT8P22-201ENST00000562317 1415 ntBASIC18.83■□□□□ 0.6
ECHDC1Q9NTX5 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.83■□□□□ 0.6
ECHDC1Q9NTX5 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 REXO1L4P-201ENST00000605109 1937 ntBASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 AC093525.8-201ENST00000624099 1342 ntBASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 AC007787.1-201ENST00000588095 1583 ntBASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 AC133539.2-201ENST00000604757 467 ntBASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.82■□□□□ 0.6
ECHDC1Q9NTX5 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ECHDC1Q9NTX5 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms