Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 NME4-207ENST00000450036 985 ntTSL 3 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 KRT8P48-201ENST00000515599 1220 ntBASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 RARRES2P9-201ENST00000565168 469 ntBASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 AC011467.4-201ENST00000594891 528 ntBASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 AC140113.2-201ENST00000604370 208 ntBASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 REXO1L2P-201ENST00000425429 2069 ntBASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 AC140479.7-201ENST00000636301 2332 ntBASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CDC42SE2Q9NRR3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 AL359258.3-201ENST00000622910 2331 ntBASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 AL353705.2-201ENST00000428243 662 ntBASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 ACTG1P14-201ENST00000446382 1122 ntBASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 SLC25A39P2-201ENST00000537614 270 ntBASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms