Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.18■□□□□ 0.34
PDLIM7Q9NR12 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 CYP46A4P-201ENST00000414953 267 ntBASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 AC245884.6-201ENST00000515672 1067 ntBASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 MBP-227ENST00000526111 581 ntTSL 4 BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 ECM1P1-201ENST00000604092 1279 ntBASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.17■□□□□ 0.34
PDLIM7Q9NR12 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 AC016700.1-201ENST00000429424 312 ntBASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 CNN2P10-201ENST00000443067 918 ntBASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 RN7SL720P-201ENST00000488178 304 ntBASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 CU633904.3-201ENST00000624042 1029 ntBASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.16■□□□□ 0.34
PDLIM7Q9NR12 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM7Q9NR12 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.15■□□□□ 0.34
PDLIM7Q9NR12 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PDLIM7Q9NR12 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM7Q9NR12 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM7Q9NR12 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM7Q9NR12 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PDLIM7Q9NR12 RPL5P21-201ENST00000404620 815 ntBASIC17.15■□□□□ 0.34
PDLIM7Q9NR12 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PDLIM7Q9NR12 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM7Q9NR12 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM7Q9NR12 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC17.15■□□□□ 0.34
PDLIM7Q9NR12 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.15■□□□□ 0.34
PDLIM7Q9NR12 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.15■□□□□ 0.34
PDLIM7Q9NR12 AL138799.1-201ENST00000448213 1675 ntBASIC17.15■□□□□ 0.34
PDLIM7Q9NR12 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms