Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 AC091951.1-201ENST00000512854 2465 ntBASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 MYO15B-237ENST00000642007 4893 ntBASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 AC025048.3-201ENST00000590609 569 ntBASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 AC005702.4-201ENST00000618393 416 ntBASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 MROH4P-201ENST00000431302 1578 ntBASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NEUROD4Q9HD90 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.71□□□□□ -0.06
NEUROD4Q9HD90 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
NEUROD4Q9HD90 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
NEUROD4Q9HD90 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.71□□□□□ -0.06
NEUROD4Q9HD90 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
NEUROD4Q9HD90 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 AGAP7P-201ENST00000582299 2062 ntBASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 AGAP14-201ENST00000624701 2060 ntBASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 AC099063.4-201ENST00000641099 1602 ntBASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 AL161772.1-201ENST00000610494 4412 ntBASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 AL133267.1-201ENST00000398220 340 ntBASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 AC015910.1-201ENST00000579400 975 ntBASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 OR2I1P-209ENST00000641730 5365 ntBASIC14.7□□□□□ -0.06
NEUROD4Q9HD90 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 LINC01101-201ENST00000622953 1884 ntBASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms