Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
ATP6V0A4Q9HBG4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
ATP6V0A4Q9HBG4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.26■□□□□ 0.35
ATP6V0A4Q9HBG4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6V0A4Q9HBG4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6V0A4Q9HBG4 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6V0A4Q9HBG4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6V0A4Q9HBG4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
ATP6V0A4Q9HBG4 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
ATP6V0A4Q9HBG4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.25■□□□□ 0.35
ATP6V0A4Q9HBG4 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.25■□□□□ 0.35
ATP6V0A4Q9HBG4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0A4Q9HBG4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0A4Q9HBG4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.25■□□□□ 0.35
ATP6V0A4Q9HBG4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ATP6V0A4Q9HBG4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0A4Q9HBG4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0A4Q9HBG4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0A4Q9HBG4 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0A4Q9HBG4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.25■□□□□ 0.35
ATP6V0A4Q9HBG4 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0A4Q9HBG4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.25■□□□□ 0.35
ATP6V0A4Q9HBG4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.25■□□□□ 0.35
ATP6V0A4Q9HBG4 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.25■□□□□ 0.35
ATP6V0A4Q9HBG4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0A4Q9HBG4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.25■□□□□ 0.35
ATP6V0A4Q9HBG4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.25■□□□□ 0.35
ATP6V0A4Q9HBG4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.25■□□□□ 0.35
ATP6V0A4Q9HBG4 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.25■□□□□ 0.35
ATP6V0A4Q9HBG4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.25■□□□□ 0.35
ATP6V0A4Q9HBG4 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.25■□□□□ 0.35
ATP6V0A4Q9HBG4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ATP6V0A4Q9HBG4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0A4Q9HBG4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.25■□□□□ 0.35
ATP6V0A4Q9HBG4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ATP6V0A4Q9HBG4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0A4Q9HBG4 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 AC084364.1-201ENST00000551967 1556 ntBASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 C1QBPP1-201ENST00000400117 770 ntBASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 SOCS2P1-201ENST00000417727 557 ntBASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 AL162726.2-201ENST00000438986 1017 ntBASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 AC026410.3-201ENST00000514280 936 ntBASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 AC009090.5-201ENST00000624886 2285 ntBASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.24■□□□□ 0.35
ATP6V0A4Q9HBG4 DBET-201ENST00000630918 3363 ntBASIC17.23■□□□□ 0.35
ATP6V0A4Q9HBG4 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0A4Q9HBG4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP6V0A4Q9HBG4 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP6V0A4Q9HBG4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0A4Q9HBG4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0A4Q9HBG4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0A4Q9HBG4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0A4Q9HBG4 DRD5P1-201ENST00000456605 1438 ntBASIC17.23■□□□□ 0.35
ATP6V0A4Q9HBG4 KRT8P22-201ENST00000562317 1415 ntBASIC17.23■□□□□ 0.35
ATP6V0A4Q9HBG4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0A4Q9HBG4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0A4Q9HBG4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ATP6V0A4Q9HBG4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0A4Q9HBG4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0A4Q9HBG4 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP6V0A4Q9HBG4 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.23■□□□□ 0.35
ATP6V0A4Q9HBG4 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0A4Q9HBG4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP6V0A4Q9HBG4 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP6V0A4Q9HBG4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP6V0A4Q9HBG4 BOLA2P3-201ENST00000404566 256 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms