Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 BX539320.1-201ENST00000623759 877 ntBASIC18.24■□□□□ 0.51
RNF41Q9H4P4 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 AC093525.8-201ENST00000624099 1342 ntBASIC18.23■□□□□ 0.51
RNF41Q9H4P4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 CICP11-201ENST00000434745 2827 ntBASIC18.23■□□□□ 0.51
RNF41Q9H4P4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 PPT1-215ENST00000641471 2368 ntBASIC18.23■□□□□ 0.51
RNF41Q9H4P4 AC148477.4-201ENST00000613430 1793 ntBASIC18.23■□□□□ 0.51
RNF41Q9H4P4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 ZBTB45P1-201ENST00000452761 1456 ntBASIC18.23■□□□□ 0.51
RNF41Q9H4P4 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 AL645937.2-201ENST00000396808 931 ntBASIC18.23■□□□□ 0.51
RNF41Q9H4P4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 AL512384.1-201ENST00000406683 331 ntBASIC18.23■□□□□ 0.51
RNF41Q9H4P4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 NUS1P3-201ENST00000423502 862 ntBASIC18.23■□□□□ 0.51
RNF41Q9H4P4 RN7SL837P-201ENST00000463010 287 ntBASIC18.23■□□□□ 0.51
RNF41Q9H4P4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 AP001063.1-201ENST00000568332 529 ntBASIC18.23■□□□□ 0.51
RNF41Q9H4P4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF41Q9H4P4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF41Q9H4P4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF41Q9H4P4 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF41Q9H4P4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RNF41Q9H4P4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF41Q9H4P4 AC007787.1-201ENST00000588095 1583 ntBASIC18.22■□□□□ 0.51
RNF41Q9H4P4 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNF41Q9H4P4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF41Q9H4P4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF41Q9H4P4 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF41Q9H4P4 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RNF41Q9H4P4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF41Q9H4P4 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF41Q9H4P4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF41Q9H4P4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNF41Q9H4P4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF41Q9H4P4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF41Q9H4P4 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF41Q9H4P4 KRT17P7-201ENST00000451704 1104 ntBASIC18.22■□□□□ 0.51
RNF41Q9H4P4 AC007389.4-201ENST00000454674 793 ntBASIC18.22■□□□□ 0.51
RNF41Q9H4P4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.22■□□□□ 0.51
RNF41Q9H4P4 AP001582.1-201ENST00000525856 295 ntBASIC18.22■□□□□ 0.51
RNF41Q9H4P4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF41Q9H4P4 AC009486.1-201ENST00000569860 813 ntBASIC18.22■□□□□ 0.51
RNF41Q9H4P4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.22■□□□□ 0.51
RNF41Q9H4P4 AC010319.3-201ENST00000597028 470 ntBASIC18.22■□□□□ 0.51
RNF41Q9H4P4 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF41Q9H4P4 AC005252.2-201ENST00000624630 1141 ntBASIC18.22■□□□□ 0.51
RNF41Q9H4P4 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF41Q9H4P4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF41Q9H4P4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF41Q9H4P4 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
RNF41Q9H4P4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms