Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NXF3Q9H4D5 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 CICP11-201ENST00000434745 2827 ntBASIC16.65■□□□□ 0.26
NXF3Q9H4D5 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 RPL5P21-201ENST00000404620 815 ntBASIC16.65■□□□□ 0.26
NXF3Q9H4D5 FAM21FP-201ENST00000426241 1131 ntBASIC16.65■□□□□ 0.26
NXF3Q9H4D5 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 RNA5SP412-201ENST00000516234 123 ntBASIC16.65■□□□□ 0.26
NXF3Q9H4D5 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 AL645728.2-202ENST00000641679 227 ntBASIC16.65■□□□□ 0.26
NXF3Q9H4D5 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
NXF3Q9H4D5 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
NXF3Q9H4D5 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
NXF3Q9H4D5 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
NXF3Q9H4D5 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
NXF3Q9H4D5 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.64■□□□□ 0.25
NXF3Q9H4D5 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NXF3Q9H4D5 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NXF3Q9H4D5 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.64■□□□□ 0.25
NXF3Q9H4D5 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NXF3Q9H4D5 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NXF3Q9H4D5 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
NXF3Q9H4D5 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NXF3Q9H4D5 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NXF3Q9H4D5 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NXF3Q9H4D5 FAM86MP-201ENST00000340703 885 ntBASIC16.64■□□□□ 0.25
NXF3Q9H4D5 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.64■□□□□ 0.25
NXF3Q9H4D5 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.64■□□□□ 0.25
NXF3Q9H4D5 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.64■□□□□ 0.25
NXF3Q9H4D5 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NXF3Q9H4D5 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.64■□□□□ 0.25
NXF3Q9H4D5 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.64■□□□□ 0.25
NXF3Q9H4D5 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
NXF3Q9H4D5 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.64■□□□□ 0.25
NXF3Q9H4D5 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NXF3Q9H4D5 ECM1P1-201ENST00000604092 1279 ntBASIC16.64■□□□□ 0.25
NXF3Q9H4D5 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.64■□□□□ 0.25
NXF3Q9H4D5 AC009542.2-202ENST00000619004 1067 ntBASIC16.64■□□□□ 0.25
NXF3Q9H4D5 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.64■□□□□ 0.25
NXF3Q9H4D5 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NXF3Q9H4D5 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NXF3Q9H4D5 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NXF3Q9H4D5 LRRC59-203ENST00000576448 1531 ntBASIC16.64■□□□□ 0.25
NXF3Q9H4D5 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NXF3Q9H4D5 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
NXF3Q9H4D5 PAUPAR-201ENST00000630360 2965 ntBASIC16.64■□□□□ 0.25
NXF3Q9H4D5 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NXF3Q9H4D5 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NXF3Q9H4D5 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.64■□□□□ 0.25
NXF3Q9H4D5 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.64■□□□□ 0.25
NXF3Q9H4D5 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
NXF3Q9H4D5 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NXF3Q9H4D5 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 KRT8P14-201ENST00000414254 1442 ntBASIC16.63■□□□□ 0.25
NXF3Q9H4D5 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms