Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP4Q9C0A0 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP4Q9C0A0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP4Q9C0A0 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNTNAP4Q9C0A0 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNTNAP4Q9C0A0 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNTNAP4Q9C0A0 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CNTNAP4Q9C0A0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CNTNAP4Q9C0A0 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC19.16■□□□□ 0.66
CNTNAP4Q9C0A0 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.16■□□□□ 0.66
CNTNAP4Q9C0A0 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNTNAP4Q9C0A0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNTNAP4Q9C0A0 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNTNAP4Q9C0A0 RN7SKP230-201ENST00000365642 335 ntBASIC19.16■□□□□ 0.66
CNTNAP4Q9C0A0 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNTNAP4Q9C0A0 KLF2P1-201ENST00000447438 1042 ntBASIC19.16■□□□□ 0.66
CNTNAP4Q9C0A0 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNTNAP4Q9C0A0 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
CNTNAP4Q9C0A0 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC19.16■□□□□ 0.66
CNTNAP4Q9C0A0 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CNTNAP4Q9C0A0 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNTNAP4Q9C0A0 COX6A1P2-201ENST00000620597 330 ntBASIC19.16■□□□□ 0.66
CNTNAP4Q9C0A0 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CNTNAP4Q9C0A0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNTNAP4Q9C0A0 FAM90A7P-201ENST00000382628 1395 ntBASIC19.16■□□□□ 0.66
CNTNAP4Q9C0A0 FAM90A23P-201ENST00000400136 1395 ntBASIC19.16■□□□□ 0.66
CNTNAP4Q9C0A0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CNTNAP4Q9C0A0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CNTNAP4Q9C0A0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.16■□□□□ 0.66
CNTNAP4Q9C0A0 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CNTNAP4Q9C0A0 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 IGLV3-15-201ENST00000518356 244 ntBASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 WDR7-208ENST00000589935 544 ntTSL 4 BASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 IRF3-215ENST00000596822 823 ntTSL 3 BASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.15■□□□□ 0.66
CNTNAP4Q9C0A0 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CNTNAP4Q9C0A0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC19.14■□□□□ 0.66
CNTNAP4Q9C0A0 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
CNTNAP4Q9C0A0 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
CNTNAP4Q9C0A0 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
CNTNAP4Q9C0A0 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CNTNAP4Q9C0A0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CNTNAP4Q9C0A0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNTNAP4Q9C0A0 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNTNAP4Q9C0A0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CNTNAP4Q9C0A0 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNTNAP4Q9C0A0 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNTNAP4Q9C0A0 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CNTNAP4Q9C0A0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNTNAP4Q9C0A0 AL008718.2-201ENST00000609206 1313 ntBASIC19.14■□□□□ 0.65
CNTNAP4Q9C0A0 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNTNAP4Q9C0A0 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNTNAP4Q9C0A0 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNTNAP4Q9C0A0 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNTNAP4Q9C0A0 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNTNAP4Q9C0A0 AC244394.1-201ENST00000435000 1665 ntBASIC19.14■□□□□ 0.65
CNTNAP4Q9C0A0 AC012441.2-201ENST00000444843 739 ntBASIC19.14■□□□□ 0.65
CNTNAP4Q9C0A0 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC19.14■□□□□ 0.65
CNTNAP4Q9C0A0 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
CNTNAP4Q9C0A0 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC19.14■□□□□ 0.65
CNTNAP4Q9C0A0 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CNTNAP4Q9C0A0 AC008825.2-201ENST00000603374 718 ntBASIC19.14■□□□□ 0.65
CNTNAP4Q9C0A0 RN7SL736P-201ENST00000613111 269 ntBASIC19.14■□□□□ 0.65
CNTNAP4Q9C0A0 AMT-239ENST00000636865 1914 ntTSL 5 BASIC19.14■□□□□ 0.65
CNTNAP4Q9C0A0 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC19.14■□□□□ 0.65
CNTNAP4Q9C0A0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.14■□□□□ 0.65
CNTNAP4Q9C0A0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CNTNAP4Q9C0A0 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 AL603832.2-201ENST00000566195 2125 ntBASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms