Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.34□□□□□ -0.11
TRIM2Q9C040 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRIM2Q9C040 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM2Q9C040 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
TRIM2Q9C040 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.34□□□□□ -0.11
TRIM2Q9C040 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM2Q9C040 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM2Q9C040 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.34□□□□□ -0.11
TRIM2Q9C040 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM2Q9C040 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
TRIM2Q9C040 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM2Q9C040 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.34□□□□□ -0.11
TRIM2Q9C040 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.34□□□□□ -0.11
TRIM2Q9C040 BCRP1-201ENST00000444246 691 ntBASIC14.34□□□□□ -0.11
TRIM2Q9C040 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.34□□□□□ -0.11
TRIM2Q9C040 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM2Q9C040 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.34□□□□□ -0.11
TRIM2Q9C040 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM2Q9C040 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.34□□□□□ -0.11
TRIM2Q9C040 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM2Q9C040 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.34□□□□□ -0.11
TRIM2Q9C040 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.34□□□□□ -0.11
TRIM2Q9C040 DUX4L27-201ENST00000554796 1261 ntBASIC14.34□□□□□ -0.11
TRIM2Q9C040 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.34□□□□□ -0.11
TRIM2Q9C040 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.34□□□□□ -0.11
TRIM2Q9C040 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM2Q9C040 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM2Q9C040 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM2Q9C040 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM2Q9C040 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRIM2Q9C040 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM2Q9C040 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.34□□□□□ -0.11
TRIM2Q9C040 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.34□□□□□ -0.11
TRIM2Q9C040 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM2Q9C040 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM2Q9C040 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM2Q9C040 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM2Q9C040 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM2Q9C040 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM2Q9C040 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM2Q9C040 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.34□□□□□ -0.11
TRIM2Q9C040 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM2Q9C040 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM2Q9C040 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM2Q9C040 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM2Q9C040 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.34□□□□□ -0.11
TRIM2Q9C040 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM2Q9C040 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
TRIM2Q9C040 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.33□□□□□ -0.11
TRIM2Q9C040 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRIM2Q9C040 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRIM2Q9C040 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRIM2Q9C040 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRIM2Q9C040 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
TRIM2Q9C040 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM2Q9C040 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM2Q9C040 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM2Q9C040 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM2Q9C040 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM2Q9C040 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRIM2Q9C040 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM2Q9C040 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM2Q9C040 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM2Q9C040 AL080243.2-201ENST00000418783 582 ntBASIC14.33□□□□□ -0.12
TRIM2Q9C040 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.33□□□□□ -0.12
TRIM2Q9C040 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.33□□□□□ -0.12
TRIM2Q9C040 KLF2P3-201ENST00000451977 1087 ntBASIC14.33□□□□□ -0.12
TRIM2Q9C040 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.33□□□□□ -0.12
TRIM2Q9C040 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.33□□□□□ -0.12
TRIM2Q9C040 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.33□□□□□ -0.12
TRIM2Q9C040 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.33□□□□□ -0.12
TRIM2Q9C040 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.33□□□□□ -0.12
TRIM2Q9C040 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.33□□□□□ -0.12
TRIM2Q9C040 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.33□□□□□ -0.12
TRIM2Q9C040 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.33□□□□□ -0.12
TRIM2Q9C040 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.33□□□□□ -0.12
TRIM2Q9C040 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.33□□□□□ -0.12
TRIM2Q9C040 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.33□□□□□ -0.12
TRIM2Q9C040 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TRIM2Q9C040 AL033527.5-202ENST00000641632 1098 ntBASIC14.33□□□□□ -0.12
TRIM2Q9C040 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.33□□□□□ -0.12
TRIM2Q9C040 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRIM2Q9C040 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.33□□□□□ -0.12
TRIM2Q9C040 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM2Q9C040 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM2Q9C040 AC084364.1-201ENST00000551967 1556 ntBASIC14.33□□□□□ -0.12
TRIM2Q9C040 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM2Q9C040 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRIM2Q9C040 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM2Q9C040 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM2Q9C040 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM2Q9C040 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM2Q9C040 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM2Q9C040 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM2Q9C040 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
TRIM2Q9C040 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.33□□□□□ -0.12
TRIM2Q9C040 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM2Q9C040 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM2Q9C040 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.33□□□□□ -0.12
TRIM2Q9C040 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms