Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 AC079776.2-201ENST00000641154 1609 ntBASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 AL359881.3-201ENST00000602640 1721 ntBASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 PI4KAP1-204ENST00000612579 1703 ntBASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 AL355994.1-201ENST00000424379 260 ntBASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 TSPY5P-201ENST00000426936 936 ntBASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 FAM8A3P-201ENST00000427218 844 ntBASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 AL645939.2-201ENST00000427340 991 ntBASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 PRYP5-201ENST00000451909 266 ntBASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 AC087163.2-201ENST00000457299 853 ntBASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 SNORA78-201ENST00000459373 127 ntBASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 EHF-205ENST00000527935 557 ntTSL 2 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 EMC4-208ENST00000559078 599 ntTSL 3 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 AC139887.4-201ENST00000607877 719 ntBASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 AC073592.4-201ENST00000623827 446 ntBASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 AC107918.4-201ENST00000641966 3141 ntBASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LCE3DQ9BYE3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms