Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 AP003680.1-201ENST00000598970 3660 ntBASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 MIR600HG-201ENST00000449175 5984 ntBASIC13□□□□□ -0.33
SSBP3Q9BWW4 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSBP3Q9BWW4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSBP3Q9BWW4 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSBP3Q9BWW4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13□□□□□ -0.33
SSBP3Q9BWW4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSBP3Q9BWW4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
SSBP3Q9BWW4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
SSBP3Q9BWW4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SSBP3Q9BWW4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13□□□□□ -0.33
SSBP3Q9BWW4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13□□□□□ -0.33
SSBP3Q9BWW4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SSBP3Q9BWW4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SSBP3Q9BWW4 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP3Q9BWW4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13□□□□□ -0.33
SSBP3Q9BWW4 AL121723.1-201ENST00000445194 1519 ntBASIC13□□□□□ -0.33
SSBP3Q9BWW4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSBP3Q9BWW4 CYP2AB1P-202ENST00000454440 1456 ntBASIC13□□□□□ -0.33
SSBP3Q9BWW4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SSBP3Q9BWW4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
SSBP3Q9BWW4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
SSBP3Q9BWW4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSBP3Q9BWW4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13□□□□□ -0.33
SSBP3Q9BWW4 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP3Q9BWW4 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP3Q9BWW4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP3Q9BWW4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP3Q9BWW4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP3Q9BWW4 AL133267.1-201ENST00000398220 340 ntBASIC13□□□□□ -0.33
SSBP3Q9BWW4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SSBP3Q9BWW4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13□□□□□ -0.33
SSBP3Q9BWW4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP3Q9BWW4 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13□□□□□ -0.33
SSBP3Q9BWW4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13□□□□□ -0.33
SSBP3Q9BWW4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13□□□□□ -0.33
SSBP3Q9BWW4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13□□□□□ -0.33
SSBP3Q9BWW4 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13□□□□□ -0.33
SSBP3Q9BWW4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP3Q9BWW4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13□□□□□ -0.33
SSBP3Q9BWW4 AC133539.2-201ENST00000604757 467 ntBASIC13□□□□□ -0.33
SSBP3Q9BWW4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
SSBP3Q9BWW4 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SSBP3Q9BWW4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SSBP3Q9BWW4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSBP3Q9BWW4 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SSBP3Q9BWW4 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
SSBP3Q9BWW4 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP3Q9BWW4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SSBP3Q9BWW4 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP3Q9BWW4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 WFDC1-204ENST00000613603 549 ntBASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 AL033527.5-201ENST00000641382 801 ntBASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SSBP3Q9BWW4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms