Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 ARSEP1-201ENST00000420443 635 ntBASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 ACA64.2-201ENST00000459014 129 ntBASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 AP001889.1-201ENST00000525414 633 ntBASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 AL359881.2-201ENST00000602973 570 ntBASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 AC017083.2-201ENST00000608069 979 ntBASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDK5RAP1Q96SZ6 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 AC093525.8-201ENST00000624099 1342 ntBASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 AC112492.5-201ENST00000421897 457 ntBASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 AC244107.1-201ENST00000442033 332 ntBASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 ATP5G2P4-201ENST00000442175 420 ntBASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 IGHV3-71-201ENST00000523324 359 ntBASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 MIR6805-201ENST00000615055 62 ntBASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.06■□□□□ 0.16
CDK5RAP1Q96SZ6 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 AC079776.1-201ENST00000401540 1152 ntBASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms