Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNX18Q96RF0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.24□□□□□ -0.13
SNX18Q96RF0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNX18Q96RF0 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.24□□□□□ -0.13
SNX18Q96RF0 SPCS2P4-201ENST00000436160 681 ntBASIC14.24□□□□□ -0.13
SNX18Q96RF0 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.24□□□□□ -0.13
SNX18Q96RF0 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.24□□□□□ -0.13
SNX18Q96RF0 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNX18Q96RF0 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.24□□□□□ -0.13
SNX18Q96RF0 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.24□□□□□ -0.13
SNX18Q96RF0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SNX18Q96RF0 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SNX18Q96RF0 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
SNX18Q96RF0 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.24□□□□□ -0.13
SNX18Q96RF0 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNX18Q96RF0 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNX18Q96RF0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.24□□□□□ -0.13
SNX18Q96RF0 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNX18Q96RF0 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNX18Q96RF0 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SNX18Q96RF0 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SNX18Q96RF0 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNX18Q96RF0 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.24□□□□□ -0.13
SNX18Q96RF0 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SNX18Q96RF0 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNX18Q96RF0 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.23□□□□□ -0.13
SNX18Q96RF0 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.23□□□□□ -0.13
SNX18Q96RF0 AC117489.1-201ENST00000625169 3217 ntBASIC14.23□□□□□ -0.13
SNX18Q96RF0 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.23□□□□□ -0.13
SNX18Q96RF0 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.23□□□□□ -0.13
SNX18Q96RF0 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SNX18Q96RF0 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.23□□□□□ -0.13
SNX18Q96RF0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SNX18Q96RF0 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SNX18Q96RF0 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNX18Q96RF0 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SNX18Q96RF0 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SNX18Q96RF0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.23□□□□□ -0.13
SNX18Q96RF0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.23□□□□□ -0.13
SNX18Q96RF0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.23□□□□□ -0.13
SNX18Q96RF0 AP000344.2-201ENST00000512987 629 ntBASIC14.23□□□□□ -0.13
SNX18Q96RF0 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.23□□□□□ -0.13
SNX18Q96RF0 RFPL4AP1-201ENST00000530883 850 ntBASIC14.23□□□□□ -0.13
SNX18Q96RF0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNX18Q96RF0 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.23□□□□□ -0.13
SNX18Q96RF0 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.23□□□□□ -0.13
SNX18Q96RF0 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.23□□□□□ -0.13
SNX18Q96RF0 AL450472.2-201ENST00000603663 1156 ntBASIC14.23□□□□□ -0.13
SNX18Q96RF0 AC027612.4-201ENST00000605371 583 ntBASIC14.23□□□□□ -0.13
SNX18Q96RF0 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNX18Q96RF0 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SNX18Q96RF0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNX18Q96RF0 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
SNX18Q96RF0 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNX18Q96RF0 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNX18Q96RF0 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.23□□□□□ -0.13
SNX18Q96RF0 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNX18Q96RF0 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNX18Q96RF0 AC090616.6-203ENST00000579186 1945 ntBASIC14.23□□□□□ -0.13
SNX18Q96RF0 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SNX18Q96RF0 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SNX18Q96RF0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNX18Q96RF0 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SNX18Q96RF0 KRT8P37-201ENST00000451609 1420 ntBASIC14.23□□□□□ -0.13
SNX18Q96RF0 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.23□□□□□ -0.13
SNX18Q96RF0 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNX18Q96RF0 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNX18Q96RF0 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNX18Q96RF0 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.23□□□□□ -0.13
SNX18Q96RF0 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNX18Q96RF0 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNX18Q96RF0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNX18Q96RF0 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.22□□□□□ -0.13
SNX18Q96RF0 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.22□□□□□ -0.13
SNX18Q96RF0 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.22□□□□□ -0.13
SNX18Q96RF0 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNX18Q96RF0 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNX18Q96RF0 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SNX18Q96RF0 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SNX18Q96RF0 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNX18Q96RF0 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SNX18Q96RF0 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNX18Q96RF0 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNX18Q96RF0 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNX18Q96RF0 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.22□□□□□ -0.13
SNX18Q96RF0 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
SNX18Q96RF0 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNX18Q96RF0 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNX18Q96RF0 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SNX18Q96RF0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNX18Q96RF0 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SNX18Q96RF0 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.22□□□□□ -0.13
SNX18Q96RF0 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.22□□□□□ -0.13
SNX18Q96RF0 AL645939.2-201ENST00000427340 991 ntBASIC14.22□□□□□ -0.13
SNX18Q96RF0 CYMP-203ENST00000474680 1263 ntBASIC14.22□□□□□ -0.13
SNX18Q96RF0 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.22□□□□□ -0.13
SNX18Q96RF0 AC079140.1-201ENST00000508039 487 ntBASIC14.22□□□□□ -0.13
SNX18Q96RF0 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.22□□□□□ -0.13
SNX18Q96RF0 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.22□□□□□ -0.13
SNX18Q96RF0 IGHV3-62-201ENST00000520057 340 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms