Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SYNGAP1Q96PV0 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.57■□□□□ 0.4
SYNGAP1Q96PV0 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SYNGAP1Q96PV0 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.57■□□□□ 0.4
SYNGAP1Q96PV0 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.57■□□□□ 0.4
SYNGAP1Q96PV0 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SYNGAP1Q96PV0 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.57■□□□□ 0.4
SYNGAP1Q96PV0 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYNGAP1Q96PV0 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.57■□□□□ 0.4
SYNGAP1Q96PV0 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SYNGAP1Q96PV0 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYNGAP1Q96PV0 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYNGAP1Q96PV0 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
SYNGAP1Q96PV0 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
SYNGAP1Q96PV0 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 ACTBP8-201ENST00000403258 1108 ntBASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 RNA5SP486-201ENST00000515961 83 ntBASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SYNGAP1Q96PV0 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 FER1L4-210ENST00000615531 5998 ntBASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 AL118558.3-201ENST00000607414 1079 ntBASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 AL022328.3-201ENST00000607943 679 ntBASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 AC006453.4-201ENST00000636949 1252 ntBASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 AC105917.1-201ENST00000506637 2539 ntBASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms