Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 AC134915.1-201ENST00000426461 574 ntBASIC12.88□□□□□ -0.35
GAFA1Q96PS6 AL442647.2-201ENST00000429864 857 ntBASIC12.88□□□□□ -0.35
GAFA1Q96PS6 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 AC120045.2-201ENST00000567334 178 ntBASIC12.88□□□□□ -0.35
GAFA1Q96PS6 COX11-202ENST00000571584 1108 ntTSL 2 BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 SPDYE22P-201ENST00000582158 798 ntBASIC12.88□□□□□ -0.35
GAFA1Q96PS6 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 MST1L-201ENST00000442552 2185 ntBASIC12.88□□□□□ -0.35
GAFA1Q96PS6 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
GAFA1Q96PS6 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 AC023157.3-201ENST00000619086 2088 ntBASIC12.87□□□□□ -0.35
GAFA1Q96PS6 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 CTBP2P3-201ENST00000585629 1255 ntBASIC12.87□□□□□ -0.35
GAFA1Q96PS6 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
GAFA1Q96PS6 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms