Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RNF31Q96EP0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.04■□□□□ -0
RNF31Q96EP0 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNF31Q96EP0 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNF31Q96EP0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNF31Q96EP0 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
RNF31Q96EP0 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF31Q96EP0 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.04■□□□□ -0
RNF31Q96EP0 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNF31Q96EP0 AL607033.1-201ENST00000623900 1599 ntBASIC15.04■□□□□ -0
RNF31Q96EP0 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.04■□□□□ -0
RNF31Q96EP0 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF31Q96EP0 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF31Q96EP0 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNF31Q96EP0 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RNF31Q96EP0 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNF31Q96EP0 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.04■□□□□ -0
RNF31Q96EP0 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.04■□□□□ -0
RNF31Q96EP0 RPL13P2-201ENST00000440687 659 ntBASIC15.04■□□□□ -0
RNF31Q96EP0 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RNF31Q96EP0 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.04■□□□□ -0
RNF31Q96EP0 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.04■□□□□ -0
RNF31Q96EP0 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.04■□□□□ -0
RNF31Q96EP0 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNF31Q96EP0 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.04■□□□□ -0
RNF31Q96EP0 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.04■□□□□ -0
RNF31Q96EP0 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.04■□□□□ -0
RNF31Q96EP0 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.04■□□□□ -0
RNF31Q96EP0 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.04■□□□□ -0
RNF31Q96EP0 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNF31Q96EP0 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RNF31Q96EP0 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.04■□□□□ -0
RNF31Q96EP0 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RNF31Q96EP0 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RNF31Q96EP0 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RNF31Q96EP0 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RNF31Q96EP0 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.04■□□□□ -0
RNF31Q96EP0 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RNF31Q96EP0 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNF31Q96EP0 TSPY26P-202ENST00000565928 3884 ntBASIC15.04■□□□□ -0
RNF31Q96EP0 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
RNF31Q96EP0 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF31Q96EP0 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF31Q96EP0 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RNF31Q96EP0 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF31Q96EP0 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNF31Q96EP0 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RNF31Q96EP0 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.03■□□□□ -0
RNF31Q96EP0 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RNF31Q96EP0 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RNF31Q96EP0 Z97205.2-201ENST00000564697 1639 ntBASIC15.03■□□□□ -0
RNF31Q96EP0 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNF31Q96EP0 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RNF31Q96EP0 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNF31Q96EP0 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.03■□□□□ -0
RNF31Q96EP0 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
RNF31Q96EP0 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.03■□□□□ -0
RNF31Q96EP0 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RNF31Q96EP0 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.03■□□□□ -0
RNF31Q96EP0 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNF31Q96EP0 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RNF31Q96EP0 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RNF31Q96EP0 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.03■□□□□ -0
RNF31Q96EP0 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNF31Q96EP0 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
RNF31Q96EP0 HAUS4P1-201ENST00000406739 1145 ntBASIC15.03■□□□□ -0
RNF31Q96EP0 AC119751.2-201ENST00000504529 210 ntBASIC15.03■□□□□ -0
RNF31Q96EP0 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.03■□□□□ -0
RNF31Q96EP0 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.03■□□□□ -0
RNF31Q96EP0 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.03■□□□□ -0
RNF31Q96EP0 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RNF31Q96EP0 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.03■□□□□ -0
RNF31Q96EP0 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.03■□□□□ -0
RNF31Q96EP0 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.03■□□□□ -0
RNF31Q96EP0 AL162274.1-201ENST00000617191 1098 ntBASIC15.03■□□□□ -0
RNF31Q96EP0 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.03■□□□□ -0
RNF31Q96EP0 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.03■□□□□ -0
RNF31Q96EP0 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
RNF31Q96EP0 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.03■□□□□ -0
RNF31Q96EP0 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RNF31Q96EP0 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RNF31Q96EP0 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.03■□□□□ -0
RNF31Q96EP0 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
RNF31Q96EP0 MSTO2P-201ENST00000314835 1709 ntBASIC15.03■□□□□ -0
RNF31Q96EP0 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.03■□□□□ -0
RNF31Q96EP0 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNF31Q96EP0 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNF31Q96EP0 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNF31Q96EP0 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.03■□□□□ -0
RNF31Q96EP0 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.03■□□□□ -0
RNF31Q96EP0 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.03■□□□□ -0
RNF31Q96EP0 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RNF31Q96EP0 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.02■□□□□ -0
RNF31Q96EP0 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RNF31Q96EP0 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RNF31Q96EP0 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RNF31Q96EP0 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RNF31Q96EP0 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
RNF31Q96EP0 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
RNF31Q96EP0 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms