Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 VDAC1P7-201ENST00000462417 847 ntBASIC13.64□□□□□ -0.23
TMEM54Q969K7 RPL13AP25-201ENST00000484130 612 ntBASIC13.64□□□□□ -0.23
TMEM54Q969K7 AC004066.1-201ENST00000502488 802 ntBASIC13.64□□□□□ -0.23
TMEM54Q969K7 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.64□□□□□ -0.23
TMEM54Q969K7 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM54Q969K7 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.64□□□□□ -0.23
TMEM54Q969K7 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM54Q969K7 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.64□□□□□ -0.23
TMEM54Q969K7 RN7SL204P-201ENST00000582831 262 ntBASIC13.64□□□□□ -0.23
TMEM54Q969K7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.64□□□□□ -0.23
TMEM54Q969K7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.64□□□□□ -0.23
TMEM54Q969K7 AC004233.3-201ENST00000607794 1269 ntBASIC13.64□□□□□ -0.23
TMEM54Q969K7 MIR8072-201ENST00000614241 80 ntBASIC13.64□□□□□ -0.23
TMEM54Q969K7 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
TMEM54Q969K7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.64□□□□□ -0.23
TMEM54Q969K7 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.64□□□□□ -0.23
TMEM54Q969K7 AC008761.3-201ENST00000624803 892 ntBASIC13.64□□□□□ -0.23
TMEM54Q969K7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.64□□□□□ -0.23
TMEM54Q969K7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TMEM54Q969K7 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM54Q969K7 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TMEM54Q969K7 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TMEM54Q969K7 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.64□□□□□ -0.23
TMEM54Q969K7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TMEM54Q969K7 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM54Q969K7 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.63□□□□□ -0.23
TMEM54Q969K7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM54Q969K7 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM54Q969K7 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.63□□□□□ -0.23
TMEM54Q969K7 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM54Q969K7 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.63□□□□□ -0.23
TMEM54Q969K7 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM54Q969K7 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TMEM54Q969K7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.63□□□□□ -0.23
TMEM54Q969K7 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM54Q969K7 AC007541.1-201ENST00000570282 1469 ntBASIC13.63□□□□□ -0.23
TMEM54Q969K7 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM54Q969K7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM54Q969K7 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TMEM54Q969K7 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM54Q969K7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM54Q969K7 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM54Q969K7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM54Q969K7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM54Q969K7 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.63□□□□□ -0.23
TMEM54Q969K7 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM54Q969K7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.63□□□□□ -0.23
TMEM54Q969K7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.63□□□□□ -0.23
TMEM54Q969K7 AC002472.2-201ENST00000442739 958 ntBASIC13.63□□□□□ -0.23
TMEM54Q969K7 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM54Q969K7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM54Q969K7 AC104596.2-201ENST00000512793 793 ntBASIC13.63□□□□□ -0.23
TMEM54Q969K7 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.63□□□□□ -0.23
TMEM54Q969K7 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.63□□□□□ -0.23
TMEM54Q969K7 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.63□□□□□ -0.23
TMEM54Q969K7 AL132655.2-201ENST00000596276 594 ntBASIC13.63□□□□□ -0.23
TMEM54Q969K7 AC107373.2-201ENST00000607735 490 ntBASIC13.63□□□□□ -0.23
TMEM54Q969K7 AC093726.1-201ENST00000608064 963 ntBASIC13.63□□□□□ -0.23
TMEM54Q969K7 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM54Q969K7 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
TMEM54Q969K7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM54Q969K7 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
TMEM54Q969K7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.63□□□□□ -0.23
TMEM54Q969K7 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM54Q969K7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM54Q969K7 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.63□□□□□ -0.23
TMEM54Q969K7 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
TMEM54Q969K7 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM54Q969K7 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM54Q969K7 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.63□□□□□ -0.23
TMEM54Q969K7 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM54Q969K7 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM54Q969K7 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM54Q969K7 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.63□□□□□ -0.23
TMEM54Q969K7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.63□□□□□ -0.23
TMEM54Q969K7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TMEM54Q969K7 AP000845.1-201ENST00000581677 2131 ntBASIC13.63□□□□□ -0.23
TMEM54Q969K7 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM54Q969K7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM54Q969K7 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms