Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 BRF1-204ENST00000392557 3579 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 BOD1L1-201ENST00000040738 10565 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 CFAP65-207ENST00000441968 3416 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 LINC00664-202ENST00000596718 3029 ntTSL 5 BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 VWDE-206ENST00000614403 4701 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 VPS33B-201ENST00000333371 2767 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 CUX1-205ENST00000425244 2776 ntTSL 2 BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 KIF22-202ENST00000400751 2493 ntTSL 2 BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 AC026250.1-201ENST00000500698 2311 ntTSL 2 BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 TBC1D8-201ENST00000376840 3627 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 KIAA1755-201ENST00000279024 6429 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 AGAP7P-201ENST00000582299 2062 ntBASIC9.43□□□□□ -0.9
SVIPQ8NHG7 AL450306.1-201ENST00000434097 2028 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 GPBP1-208ENST00000514387 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 SEC23B-203ENST00000377465 3229 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 ZNF331-220ENST00000513999 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 NIF3L1-202ENST00000409020 1680 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 ETNK1-201ENST00000266517 7159 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 CARMN-209ENST00000602315 2706 ntTSL 5 BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 LOXL3-201ENST00000264094 3502 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 MAPK10-274ENST00000641120 2456 ntBASIC9.42□□□□□ -0.9
SVIPQ8NHG7 RFPL2-201ENST00000248980 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 CAMTA2-202ENST00000361571 4777 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 CLCN5-203ENST00000376091 3046 ntTSL 2 BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 AL354714.2-201ENST00000425270 1097 ntBASIC9.42□□□□□ -0.9
SVIPQ8NHG7 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 USP9YP2-201ENST00000504503 1000 ntBASIC9.42□□□□□ -0.9
SVIPQ8NHG7 USP9YP1-201ENST00000513521 1002 ntBASIC9.42□□□□□ -0.9
SVIPQ8NHG7 HTR4-207ENST00000520514 1236 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 ADAMTS7P3-201ENST00000566116 3716 ntBASIC9.42□□□□□ -0.9
SVIPQ8NHG7 CAMTA2-201ENST00000348066 4491 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 ATF3-211ENST00000613954 2031 ntTSL 5 BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 LILRB1-206ENST00000396332 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 AC019155.2-201ENST00000420224 1918 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 OR10G3-203ENST00000641185 2640 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 MINK1-203ENST00000453408 3939 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 STAU1-202ENST00000347458 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 STAU1-204ENST00000371792 3130 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 MDH1-201ENST00000233114 1650 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SVIPQ8NHG7 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 AC105250.1-201ENST00000509378 2057 ntBASIC9.41□□□□□ -0.9
SVIPQ8NHG7 OR13A1-203ENST00000553795 2078 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 ANKMY1-201ENST00000272972 3228 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 AVL9-202ENST00000409301 4336 ntTSL 5 BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 CDRT1-204ENST00000395906 2571 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 AC138761.4-202ENST00000577956 2552 ntBASIC9.41□□□□□ -0.9
SVIPQ8NHG7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 ALDH7A1-231ENST00000637206 2466 ntTSL 5 BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 TRPC7-206ENST00000513104 2987 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 AP005058.1-201ENST00000580193 2975 ntBASIC9.41□□□□□ -0.9
SVIPQ8NHG7 TRAF3IP2-207ENST00000368761 5128 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 SERPINA3-204ENST00000482740 2420 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 AC010182.1-201ENST00000548943 2434 ntBASIC9.41□□□□□ -0.9
SVIPQ8NHG7 C3orf35-201ENST00000328376 1859 ntAPPRIS P5 TSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 CAPN9-201ENST00000271971 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 EXT2-201ENST00000343631 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 ST8SIA6-AS1-201ENST00000377597 1811 ntTSL 2 BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC9.41□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms