Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
BEST2Q8NFU1 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.64■□□□□ 0.26
BEST2Q8NFU1 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 AC007950.2-201ENST00000615045 2347 ntBASIC16.64■□□□□ 0.25
BEST2Q8NFU1 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 BAATP1-201ENST00000412284 1225 ntBASIC16.64■□□□□ 0.25
BEST2Q8NFU1 AC022210.1-201ENST00000449856 793 ntBASIC16.64■□□□□ 0.25
BEST2Q8NFU1 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 AL512343.1-201ENST00000605837 169 ntBASIC16.64■□□□□ 0.25
BEST2Q8NFU1 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.64■□□□□ 0.25
BEST2Q8NFU1 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 AC087481.3-201ENST00000602886 1894 ntBASIC16.63■□□□□ 0.25
BEST2Q8NFU1 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 KRT43P-201ENST00000434019 910 ntBASIC16.63■□□□□ 0.25
BEST2Q8NFU1 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 AC012441.1-201ENST00000446669 685 ntBASIC16.63■□□□□ 0.25
BEST2Q8NFU1 AL355864.2-201ENST00000447420 863 ntBASIC16.63■□□□□ 0.25
BEST2Q8NFU1 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 MIR6805-201ENST00000615055 62 ntBASIC16.63■□□□□ 0.25
BEST2Q8NFU1 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 AC134312.5-201ENST00000568031 1313 ntBASIC16.63■□□□□ 0.25
BEST2Q8NFU1 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 AC018665.1-201ENST00000622927 1362 ntBASIC16.63■□□□□ 0.25
BEST2Q8NFU1 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST2Q8NFU1 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms