Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 AC025678.2-201ENST00000562061 970 ntBASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 TEX28P1-201ENST00000613479 1221 ntBASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 TEX28P2-201ENST00000617764 1221 ntBASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 AC023024.2-201ENST00000623561 1993 ntBASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 AC118758.2-201ENST00000614242 2813 ntBASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LSMEM1Q8N8F7 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.27□□□□□ -0.12
LSMEM1Q8N8F7 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
LSMEM1Q8N8F7 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
LSMEM1Q8N8F7 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LSMEM1Q8N8F7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
LSMEM1Q8N8F7 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.27□□□□□ -0.12
LSMEM1Q8N8F7 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.27□□□□□ -0.12
LSMEM1Q8N8F7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.12
LSMEM1Q8N8F7 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LSMEM1Q8N8F7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LSMEM1Q8N8F7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LSMEM1Q8N8F7 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LSMEM1Q8N8F7 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
LSMEM1Q8N8F7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
LSMEM1Q8N8F7 MROH4P-201ENST00000431302 1578 ntBASIC14.27□□□□□ -0.12
LSMEM1Q8N8F7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.27□□□□□ -0.12
LSMEM1Q8N8F7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LSMEM1Q8N8F7 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
LSMEM1Q8N8F7 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
LSMEM1Q8N8F7 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LSMEM1Q8N8F7 TUBB3P1-201ENST00000405796 1332 ntBASIC14.27□□□□□ -0.12
LSMEM1Q8N8F7 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 AL133267.1-201ENST00000398220 340 ntBASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 RPL13P2-201ENST00000440687 659 ntBASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 AC015910.1-201ENST00000579400 975 ntBASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 Z92544.3-201ENST00000624747 417 ntBASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 AC091951.1-201ENST00000512854 2465 ntBASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LSMEM1Q8N8F7 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.26□□□□□ -0.13
LSMEM1Q8N8F7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.26□□□□□ -0.13
LSMEM1Q8N8F7 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.26□□□□□ -0.13
LSMEM1Q8N8F7 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.26□□□□□ -0.13
LSMEM1Q8N8F7 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.26□□□□□ -0.13
LSMEM1Q8N8F7 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LSMEM1Q8N8F7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LSMEM1Q8N8F7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.26□□□□□ -0.13
LSMEM1Q8N8F7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.26□□□□□ -0.13
LSMEM1Q8N8F7 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LSMEM1Q8N8F7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms