Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 AC010319.3-201ENST00000597028 470 ntBASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 AC005252.2-201ENST00000624630 1141 ntBASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 AC007787.1-201ENST00000588095 1583 ntBASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 AL645937.2-201ENST00000396808 931 ntBASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 NUS1P3-201ENST00000423502 862 ntBASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 GAPDHP21-201ENST00000450301 1010 ntBASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 KRT17P7-201ENST00000451704 1104 ntBASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 AC007389.4-201ENST00000454674 793 ntBASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 AC009486.1-201ENST00000569860 813 ntBASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAM1L1Q8N609 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAM1L1Q8N609 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAM1L1Q8N609 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAM1L1Q8N609 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
TRAM1L1Q8N609 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAM1L1Q8N609 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAM1L1Q8N609 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAM1L1Q8N609 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAM1L1Q8N609 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAM1L1Q8N609 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAM1L1Q8N609 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAM1L1Q8N609 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAM1L1Q8N609 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAM1L1Q8N609 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAM1L1Q8N609 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAM1L1Q8N609 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TRAM1L1Q8N609 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAM1L1Q8N609 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TRAM1L1Q8N609 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAM1L1Q8N609 ACKR1-201ENST00000368121 1240 ntBASIC15.27■□□□□ 0.04
TRAM1L1Q8N609 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAM1L1Q8N609 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TRAM1L1Q8N609 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAM1L1Q8N609 ACTG1P3-201ENST00000431775 1114 ntBASIC15.27■□□□□ 0.04
TRAM1L1Q8N609 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAM1L1Q8N609 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAM1L1Q8N609 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAM1L1Q8N609 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms