Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 OR2K2-202ENST00000374428 1038 ntBASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 RPSAP31-201ENST00000416648 895 ntBASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 RN7SL736P-201ENST00000613111 269 ntBASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 AC051619.9-201ENST00000623237 597 ntBASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL27A1Q8IZC6 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 AC023090.2-201ENST00000625182 2110 ntBASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 AC026316.1-201ENST00000398900 414 ntBASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 AL355334.1-201ENST00000417713 215 ntBASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 AC078875.1-201ENST00000431907 724 ntBASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 AC006335.1-201ENST00000445200 547 ntBASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 NOC2LP1-201ENST00000450578 752 ntBASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 MIR7845-201ENST00000618396 99 ntBASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 AC011491.1-203ENST00000637688 543 ntBASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.22□□□□□ -0.13
COL27A1Q8IZC6 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COL27A1Q8IZC6 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COL27A1Q8IZC6 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
COL27A1Q8IZC6 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.21□□□□□ -0.13
COL27A1Q8IZC6 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.21□□□□□ -0.13
COL27A1Q8IZC6 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
COL27A1Q8IZC6 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
COL27A1Q8IZC6 TBC1D3J-201ENST00000620719 1426 ntBASIC14.21□□□□□ -0.13
COL27A1Q8IZC6 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COL27A1Q8IZC6 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
COL27A1Q8IZC6 FAM58BP-201ENST00000439056 645 ntBASIC14.21□□□□□ -0.13
COL27A1Q8IZC6 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.21□□□□□ -0.13
COL27A1Q8IZC6 AC026803.1-201ENST00000569130 274 ntBASIC14.21□□□□□ -0.13
COL27A1Q8IZC6 AC008805.1-201ENST00000590892 364 ntBASIC14.21□□□□□ -0.13
COL27A1Q8IZC6 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
COL27A1Q8IZC6 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
COL27A1Q8IZC6 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.21□□□□□ -0.13
COL27A1Q8IZC6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.21□□□□□ -0.13
COL27A1Q8IZC6 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
COL27A1Q8IZC6 AP000845.1-201ENST00000581677 2131 ntBASIC14.21□□□□□ -0.13
COL27A1Q8IZC6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
COL27A1Q8IZC6 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
COL27A1Q8IZC6 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.21□□□□□ -0.13
COL27A1Q8IZC6 PCDHB19P-201ENST00000570871 2371 ntBASIC14.21□□□□□ -0.14
COL27A1Q8IZC6 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.21□□□□□ -0.14
COL27A1Q8IZC6 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
COL27A1Q8IZC6 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
COL27A1Q8IZC6 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
COL27A1Q8IZC6 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.21□□□□□ -0.14
COL27A1Q8IZC6 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
COL27A1Q8IZC6 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
COL27A1Q8IZC6 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
COL27A1Q8IZC6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
COL27A1Q8IZC6 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
COL27A1Q8IZC6 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
COL27A1Q8IZC6 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.21□□□□□ -0.14
COL27A1Q8IZC6 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.21□□□□□ -0.14
COL27A1Q8IZC6 TLE1P1-201ENST00000422965 589 ntBASIC14.21□□□□□ -0.14
COL27A1Q8IZC6 AC098935.1-201ENST00000446057 611 ntBASIC14.21□□□□□ -0.14
COL27A1Q8IZC6 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
COL27A1Q8IZC6 TMCO5B-205ENST00000530020 894 ntBASIC14.21□□□□□ -0.14
COL27A1Q8IZC6 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.21□□□□□ -0.14
COL27A1Q8IZC6 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.21□□□□□ -0.14
COL27A1Q8IZC6 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.14
COL27A1Q8IZC6 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
COL27A1Q8IZC6 AC007718.1-201ENST00000621078 280 ntBASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms