Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC170Q8IYT3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC170Q8IYT3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC170Q8IYT3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 TPM4P1-201ENST00000436100 807 ntBASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 AC069335.1-201ENST00000489972 472 ntBASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC170Q8IYT3 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
CCDC170Q8IYT3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CCDC170Q8IYT3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CCDC170Q8IYT3 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC170Q8IYT3 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC170Q8IYT3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC170Q8IYT3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC170Q8IYT3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.7■□□□□ 0.26
CCDC170Q8IYT3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC170Q8IYT3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC170Q8IYT3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC170Q8IYT3 TARDBPP1-201ENST00000442013 1203 ntBASIC16.7■□□□□ 0.26
CCDC170Q8IYT3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC170Q8IYT3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.7■□□□□ 0.26
CCDC170Q8IYT3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.7■□□□□ 0.26
CCDC170Q8IYT3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC170Q8IYT3 AC105021.1-202ENST00000570572 669 ntBASIC16.7■□□□□ 0.26
CCDC170Q8IYT3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC170Q8IYT3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC170Q8IYT3 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC170Q8IYT3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC170Q8IYT3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC170Q8IYT3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC170Q8IYT3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC170Q8IYT3 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CCDC170Q8IYT3 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC170Q8IYT3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC170Q8IYT3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC170Q8IYT3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC170Q8IYT3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
CCDC170Q8IYT3 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC170Q8IYT3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC170Q8IYT3 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC170Q8IYT3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC170Q8IYT3 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC170Q8IYT3 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC170Q8IYT3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC170Q8IYT3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC170Q8IYT3 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CCDC170Q8IYT3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC170Q8IYT3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CCDC170Q8IYT3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC170Q8IYT3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC170Q8IYT3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC170Q8IYT3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
CCDC170Q8IYT3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC170Q8IYT3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC170Q8IYT3 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC170Q8IYT3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC170Q8IYT3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC170Q8IYT3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CCDC170Q8IYT3 AL590627.1-203ENST00000421194 1026 ntBASIC16.69■□□□□ 0.26
CCDC170Q8IYT3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.69■□□□□ 0.26
CCDC170Q8IYT3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC170Q8IYT3 AL592309.1-201ENST00000443127 649 ntBASIC16.69■□□□□ 0.26
CCDC170Q8IYT3 TIMM8BP1-201ENST00000452384 211 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms