Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 AC136604.1-201ENST00000418535 575 ntBASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 AC142381.1-201ENST00000426099 345 ntBASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 AC079781.3-201ENST00000449110 356 ntBASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 AC074386.1-202ENST00000463561 864 ntBASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 AP002472.1-201ENST00000577490 586 ntBASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 AC027307.2-201ENST00000591252 911 ntBASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 AC011467.4-201ENST00000594891 528 ntBASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 AC099522.2-201ENST00000607001 744 ntBASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 AC026979.3-201ENST00000607315 403 ntBASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 Z83851.2-201ENST00000609564 659 ntBASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 LINC01230-201ENST00000625222 3017 ntBASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 AMT-224ENST00000635808 1610 ntTSL 5 BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 AC041040.2-201ENST00000622926 2899 ntBASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 AKAP8P1-201ENST00000434743 1349 ntBASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 MPI-203ENST00000535694 1523 ntTSL 2 BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 KLK8-202ENST00000320838 456 ntTSL 5 BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms