Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.41■□□□□ 0.22
VARS2Q5ST30 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
VARS2Q5ST30 AL391005.1-201ENST00000623953 2435 ntBASIC16.41■□□□□ 0.22
VARS2Q5ST30 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VARS2Q5ST30 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VARS2Q5ST30 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VARS2Q5ST30 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.41■□□□□ 0.22
VARS2Q5ST30 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.41■□□□□ 0.22
VARS2Q5ST30 TUBB1P2-201ENST00000422712 1306 ntBASIC16.41■□□□□ 0.22
VARS2Q5ST30 TUBB1P1-201ENST00000503144 1300 ntBASIC16.41■□□□□ 0.22
VARS2Q5ST30 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.41■□□□□ 0.22
VARS2Q5ST30 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VARS2Q5ST30 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VARS2Q5ST30 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
VARS2Q5ST30 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
VARS2Q5ST30 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VARS2Q5ST30 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.41■□□□□ 0.22
VARS2Q5ST30 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VARS2Q5ST30 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
VARS2Q5ST30 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VARS2Q5ST30 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
VARS2Q5ST30 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VARS2Q5ST30 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VARS2Q5ST30 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
VARS2Q5ST30 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VARS2Q5ST30 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VARS2Q5ST30 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VARS2Q5ST30 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
VARS2Q5ST30 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
VARS2Q5ST30 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.4■□□□□ 0.22
VARS2Q5ST30 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.4■□□□□ 0.22
VARS2Q5ST30 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VARS2Q5ST30 MIR1908-201ENST00000410394 80 ntBASIC16.4■□□□□ 0.22
VARS2Q5ST30 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC16.4■□□□□ 0.22
VARS2Q5ST30 FAM197Y7-201ENST00000432892 766 ntBASIC16.4■□□□□ 0.22
VARS2Q5ST30 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.4■□□□□ 0.22
VARS2Q5ST30 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
VARS2Q5ST30 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.4■□□□□ 0.22
VARS2Q5ST30 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
VARS2Q5ST30 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.4■□□□□ 0.22
VARS2Q5ST30 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.4■□□□□ 0.22
VARS2Q5ST30 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.4■□□□□ 0.22
VARS2Q5ST30 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VARS2Q5ST30 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.4■□□□□ 0.22
VARS2Q5ST30 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.4■□□□□ 0.22
VARS2Q5ST30 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
VARS2Q5ST30 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VARS2Q5ST30 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.4■□□□□ 0.22
VARS2Q5ST30 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VARS2Q5ST30 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VARS2Q5ST30 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
VARS2Q5ST30 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
VARS2Q5ST30 CICP13-201ENST00000422015 2789 ntBASIC16.4■□□□□ 0.22
VARS2Q5ST30 PRAL-201ENST00000624952 3286 ntBASIC16.4■□□□□ 0.22
VARS2Q5ST30 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VARS2Q5ST30 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.4■□□□□ 0.22
VARS2Q5ST30 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.4■□□□□ 0.22
VARS2Q5ST30 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VARS2Q5ST30 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
VARS2Q5ST30 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.39■□□□□ 0.22
VARS2Q5ST30 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
VARS2Q5ST30 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
VARS2Q5ST30 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
VARS2Q5ST30 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
VARS2Q5ST30 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
VARS2Q5ST30 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VARS2Q5ST30 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
VARS2Q5ST30 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VARS2Q5ST30 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.39■□□□□ 0.21
VARS2Q5ST30 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VARS2Q5ST30 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.39■□□□□ 0.21
VARS2Q5ST30 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VARS2Q5ST30 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.39■□□□□ 0.21
VARS2Q5ST30 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.39■□□□□ 0.21
VARS2Q5ST30 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.39■□□□□ 0.21
VARS2Q5ST30 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VARS2Q5ST30 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
VARS2Q5ST30 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
VARS2Q5ST30 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VARS2Q5ST30 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VARS2Q5ST30 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VARS2Q5ST30 ACTBP8-201ENST00000403258 1108 ntBASIC16.39■□□□□ 0.21
VARS2Q5ST30 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VARS2Q5ST30 YBX1P6-201ENST00000442962 1002 ntBASIC16.39■□□□□ 0.21
VARS2Q5ST30 AL355994.2-201ENST00000447882 704 ntBASIC16.39■□□□□ 0.21
VARS2Q5ST30 AC114812.1-204ENST00000449669 728 ntBASIC16.39■□□□□ 0.21
VARS2Q5ST30 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.39■□□□□ 0.21
VARS2Q5ST30 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.39■□□□□ 0.21
VARS2Q5ST30 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
VARS2Q5ST30 AC090971.1-201ENST00000559302 510 ntTSL 2 BASIC16.39■□□□□ 0.21
VARS2Q5ST30 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.39■□□□□ 0.21
VARS2Q5ST30 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.39■□□□□ 0.21
VARS2Q5ST30 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.39■□□□□ 0.21
VARS2Q5ST30 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.39■□□□□ 0.21
VARS2Q5ST30 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC16.39■□□□□ 0.21
VARS2Q5ST30 AC008687.7-202ENST00000637404 953 ntBASIC16.39■□□□□ 0.21
VARS2Q5ST30 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VARS2Q5ST30 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
VARS2Q5ST30 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VARS2Q5ST30 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms