Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 RRP7BP-205ENST00000566851 833 ntBASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 AC099568.2-201ENST00000609194 695 ntBASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.31■□□□□ 0.2
PTPN20Q4JDL3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 LINC00528-201ENST00000600723 2160 ntBASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 DRD5P1-201ENST00000456605 1438 ntBASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 AC098850.1-201ENST00000419919 790 ntBASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 DFFBP1-201ENST00000433250 979 ntBASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 MIR4745-201ENST00000577608 62 ntBASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 AL049840.4-201ENST00000602422 811 ntBASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 AL359258.3-201ENST00000622910 2331 ntBASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 AP000845.1-201ENST00000581677 2131 ntBASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN20Q4JDL3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 REXO1L4P-201ENST00000605109 1937 ntBASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 VDAC1P7-201ENST00000462417 847 ntBASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 BRI3BPP1-201ENST00000594224 787 ntBASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 AC004233.3-201ENST00000607794 1269 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms