Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHRFAM7AQ494W8 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 HAUS4P1-201ENST00000406739 1145 ntBASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 SPTLC1P1-201ENST00000447199 261 ntBASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 AC003101.2-201ENST00000612557 442 ntBASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CHRFAM7AQ494W8 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 AC138969.3-201ENST00000546612 1459 ntBASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 AC138932.2-201ENST00000548268 1459 ntBASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 AC126755.4-201ENST00000549796 1459 ntBASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 MIR346-201ENST00000362234 95 ntBASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 U91328.1-201ENST00000437528 223 ntBASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 AL109954.1-202ENST00000564051 2148 ntBASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 TP53TG3HP-202ENST00000569755 579 ntBASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms