Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
DDR1Q08345 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDR1Q08345 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.97■□□□□ 0.63
DDR1Q08345 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC18.97■□□□□ 0.63
DDR1Q08345 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDR1Q08345 RN7SKP214-201ENST00000364208 315 ntBASIC18.97■□□□□ 0.63
DDR1Q08345 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDR1Q08345 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
DDR1Q08345 RPSAP31-201ENST00000416648 895 ntBASIC18.97■□□□□ 0.63
DDR1Q08345 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
DDR1Q08345 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDR1Q08345 HNRNPA1P36-201ENST00000521313 955 ntBASIC18.97■□□□□ 0.63
DDR1Q08345 AC135983.4-201ENST00000564116 1262 ntBASIC18.97■□□□□ 0.63
DDR1Q08345 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDR1Q08345 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC18.97■□□□□ 0.63
DDR1Q08345 AL805961.1-201ENST00000642026 753 ntBASIC18.97■□□□□ 0.63
DDR1Q08345 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.97■□□□□ 0.63
DDR1Q08345 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDR1Q08345 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
DDR1Q08345 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
DDR1Q08345 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
DDR1Q08345 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDR1Q08345 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDR1Q08345 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDR1Q08345 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
DDR1Q08345 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDR1Q08345 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDR1Q08345 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDR1Q08345 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDR1Q08345 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDR1Q08345 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
DDR1Q08345 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
DDR1Q08345 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDR1Q08345 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC18.97■□□□□ 0.63
DDR1Q08345 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
DDR1Q08345 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
DDR1Q08345 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDR1Q08345 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDR1Q08345 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
DDR1Q08345 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDR1Q08345 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
DDR1Q08345 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDR1Q08345 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
DDR1Q08345 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDR1Q08345 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDR1Q08345 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DDR1Q08345 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
DDR1Q08345 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
DDR1Q08345 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DDR1Q08345 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDR1Q08345 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDR1Q08345 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.96■□□□□ 0.63
DDR1Q08345 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDR1Q08345 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC18.96■□□□□ 0.63
DDR1Q08345 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDR1Q08345 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC18.96■□□□□ 0.63
DDR1Q08345 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC18.96■□□□□ 0.63
DDR1Q08345 AL627389.1-201ENST00000413508 1182 ntBASIC18.96■□□□□ 0.63
DDR1Q08345 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC18.96■□□□□ 0.63
DDR1Q08345 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC18.96■□□□□ 0.63
DDR1Q08345 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC18.96■□□□□ 0.63
DDR1Q08345 VDAC1P1-201ENST00000439229 848 ntBASIC18.96■□□□□ 0.63
DDR1Q08345 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC18.96■□□□□ 0.63
DDR1Q08345 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC18.96■□□□□ 0.63
DDR1Q08345 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC18.96■□□□□ 0.63
DDR1Q08345 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
DDR1Q08345 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DDR1Q08345 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC18.96■□□□□ 0.63
DDR1Q08345 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDR1Q08345 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC18.96■□□□□ 0.63
DDR1Q08345 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC18.96■□□□□ 0.63
DDR1Q08345 AL132994.2-201ENST00000603120 687 ntBASIC18.96■□□□□ 0.63
DDR1Q08345 AC087045.2-201ENST00000606279 1003 ntBASIC18.96■□□□□ 0.63
DDR1Q08345 COX6A1P2-201ENST00000620597 330 ntBASIC18.96■□□□□ 0.63
DDR1Q08345 YRDCP1-201ENST00000621419 643 ntBASIC18.96■□□□□ 0.63
DDR1Q08345 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DDR1Q08345 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDR1Q08345 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
DDR1Q08345 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
DDR1Q08345 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.96■□□□□ 0.63
DDR1Q08345 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DDR1Q08345 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDR1Q08345 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC18.96■□□□□ 0.63
DDR1Q08345 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC18.96■□□□□ 0.63
DDR1Q08345 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
DDR1Q08345 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DDR1Q08345 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDR1Q08345 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.62
DDR1Q08345 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.95■□□□□ 0.62
DDR1Q08345 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDR1Q08345 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
DDR1Q08345 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDR1Q08345 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.95■□□□□ 0.62
DDR1Q08345 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDR1Q08345 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.95■□□□□ 0.62
DDR1Q08345 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
DDR1Q08345 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
DDR1Q08345 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
DDR1Q08345 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.95■□□□□ 0.62
DDR1Q08345 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms