Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 AC006122.1-201ENST00000493323 440 ntBASIC18.85■□□□□ 0.61
SCN7AQ01118 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC18.85■□□□□ 0.61
SCN7AQ01118 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC18.85■□□□□ 0.61
SCN7AQ01118 MIR3677-201ENST00000578964 60 ntBASIC18.85■□□□□ 0.61
SCN7AQ01118 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SCN7AQ01118 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SCN7AQ01118 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SCN7AQ01118 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SCN7AQ01118 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SCN7AQ01118 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SCN7AQ01118 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SCN7AQ01118 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCN7AQ01118 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC18.84■□□□□ 0.61
SCN7AQ01118 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN7AQ01118 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SCN7AQ01118 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.84■□□□□ 0.61
SCN7AQ01118 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN7AQ01118 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN7AQ01118 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.84■□□□□ 0.61
SCN7AQ01118 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN7AQ01118 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN7AQ01118 AC010491.1-201ENST00000563101 2797 ntBASIC18.84■□□□□ 0.61
SCN7AQ01118 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.84■□□□□ 0.61
SCN7AQ01118 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCN7AQ01118 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCN7AQ01118 TLE1P1-201ENST00000422965 589 ntBASIC18.84■□□□□ 0.61
SCN7AQ01118 AL157407.1-201ENST00000435784 904 ntBASIC18.84■□□□□ 0.61
SCN7AQ01118 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC18.84■□□□□ 0.61
SCN7AQ01118 NDUFS6P1-201ENST00000485187 316 ntBASIC18.84■□□□□ 0.61
SCN7AQ01118 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC18.84■□□□□ 0.61
SCN7AQ01118 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC18.84■□□□□ 0.61
SCN7AQ01118 RN7SL163P-201ENST00000583100 276 ntBASIC18.84■□□□□ 0.61
SCN7AQ01118 AC008805.1-201ENST00000590892 364 ntBASIC18.84■□□□□ 0.61
SCN7AQ01118 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCN7AQ01118 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC18.84■□□□□ 0.61
SCN7AQ01118 AC006453.1-201ENST00000636037 1257 ntBASIC18.84■□□□□ 0.61
SCN7AQ01118 NAP1L6-202ENST00000641404 1222 ntBASIC18.84■□□□□ 0.61
SCN7AQ01118 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN7AQ01118 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN7AQ01118 CAP2P1-201ENST00000557743 1390 ntBASIC18.84■□□□□ 0.61
SCN7AQ01118 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SCN7AQ01118 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC18.84■□□□□ 0.61
SCN7AQ01118 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.84■□□□□ 0.61
SCN7AQ01118 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.84■□□□□ 0.61
SCN7AQ01118 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.84■□□□□ 0.61
SCN7AQ01118 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.84■□□□□ 0.61
SCN7AQ01118 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN7AQ01118 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
SCN7AQ01118 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.83■□□□□ 0.61
SCN7AQ01118 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCN7AQ01118 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCN7AQ01118 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SCN7AQ01118 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SCN7AQ01118 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCN7AQ01118 AC104784.1-201ENST00000473096 294 ntBASIC18.83■□□□□ 0.61
SCN7AQ01118 RN7SL67P-201ENST00000492147 296 ntBASIC18.83■□□□□ 0.61
SCN7AQ01118 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.61
SCN7AQ01118 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.61
SCN7AQ01118 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC18.83■□□□□ 0.61
SCN7AQ01118 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC18.83■□□□□ 0.61
SCN7AQ01118 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC18.83■□□□□ 0.61
SCN7AQ01118 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.61
SCN7AQ01118 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCN7AQ01118 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCN7AQ01118 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.83■□□□□ 0.61
SCN7AQ01118 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCN7AQ01118 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCN7AQ01118 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SCN7AQ01118 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCN7AQ01118 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCN7AQ01118 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SCN7AQ01118 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SCN7AQ01118 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SCN7AQ01118 CICP11-201ENST00000434745 2827 ntBASIC18.83■□□□□ 0.6
SCN7AQ01118 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.83■□□□□ 0.6
SCN7AQ01118 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCN7AQ01118 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.83■□□□□ 0.6
SCN7AQ01118 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SCN7AQ01118 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SCN7AQ01118 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SCN7AQ01118 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SCN7AQ01118 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCN7AQ01118 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCN7AQ01118 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC18.82■□□□□ 0.6
SCN7AQ01118 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN7AQ01118 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC18.82■□□□□ 0.6
SCN7AQ01118 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCN7AQ01118 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.82■□□□□ 0.6
SCN7AQ01118 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC18.82■□□□□ 0.6
SCN7AQ01118 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCN7AQ01118 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC18.82■□□□□ 0.6
SCN7AQ01118 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC18.82■□□□□ 0.6
SCN7AQ01118 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN7AQ01118 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN7AQ01118 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCN7AQ01118 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCN7AQ01118 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCN7AQ01118 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN7AQ01118 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SCN7AQ01118 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms